result

Gene information

Detail information of AfisC6G04149

Location

Gene	Chr	Start	End	Strand
AfisC6G04149	chr6	740550810	740555241	-

Sequences

CDS

>AfisC6G04149
ATGTTCAGACTAATGAAGATGTTGCAATCAAACTGGAAAGTGTCAAGACAAAGCATCCTCAATTGTTATATGAATCAAAACTCTACAGAATACTGCAAGGAGGAAGTATCAATCTCTCTTTTCTTTCAAGCCTATATGAAATACTATTTTTATATTGCATTTTCAGTTTCTTATGGTTCCTTTGTTTATGCTGATTTTGCAGCTGGGATTCCGAATGTTAAATGGTTTGGAGTCGAAGGAGAATATAATGTACTCGTGATTGATTTGTTAGGACCCAGTCTTGAAGACCTCTTTAATTTTTGTAATAGAAAGTTCTCGTTGAAAACTGTTCTGATGCTTGCTGATCAAATGATAAACCGAGTTGAGTTTGTTCATGCAAAATCTTTTCTGCATAGAGATATTAAGCCTGACAATTTTCTTATGGGTTTAGGGAGGCGAGCAAATCAGGTGTACATTATTGACTTTGGCCTTGCAAAAAAATATAGGGATTCAAGTCACCAGCACATACCATATAGAGAGAATAAAAACTTGACTGGTACAGCAAGATACGCAAGTATGAACACTCACCTTGGTATAGAACAAAGCAGAAGGGATGATTTGGAGTCACTGGGATTTGTTCTCATGTATTTTTTAAGAGGAAGCCTTCCTTGGCAAGGTTTACGAGCAGGGACAAAAAAGGAAAAGTATGAAAAAATCTGCGAGAAAAAAGTTTCCACGTCAATAGAGGCTTTATGTCGTGGATATCCTACTGAATTTGCTTCATACTTCCACTACTGCCGCTCGCTTCGTTTTGATGACAAACCAGATTACACATACCTTAAAAAATTGTTCCGTGAACTATTTATACGAGAAGGATTTCATTTCGATTATATTTTCGACTGGACCATTTTGAAGTATCAGCAAGCACAGAATTCTAGCACTCCACCTCGACCAATGTTGAGTCAGAATCATGGAGCTGGACCTAGTACTGGTTTGGGTGCACCATTTGGCAGGGATAGGGCTTATGGCGGTGAAGAAAGGAGAACTGGTGGTTTGCCAGTAGATCCCAATCGTGTACGTATGCCAGCAACGGGGATTGGAGGCAGTCTATCAAAACAGAAGAATCCACTAGCAACAGATTCTACATCGACCAAAGAGGCCATGGCTTCAAATTATGGGGGGCGGTCAGGAGAGTCTTCAAGACGAGCTGTTTTTTCTAGCAGCCGGGACTCAACACCAATTGCTTCAGCAGAGCAACAACATATGAGAACTTCTTCAAGAAGACCCGCATCCAACATCAAATATTATGACTCTGCCCTGGAAGGCATTGAAGGCCTTCATCTCAACAAGGAATAG

Protein

Gene

>AfisC6G04149
AACTAAATTTCAATTAACAACCAAATACTAGATTTAGTCTCCCTAATAGATTTCACATTCATACATGTCAAAAAAATTAGGGTTTTGAGTTTCCGATTTGAAATCGATTAGATGGAGCCACGTATCGCGAACAAGTTTAGGCTTGGGAAGAAGATCGGAAGCGGATCTTTTGGCGAAATCTATCTGGGTTTGTAATTTTATCATTGATATCAGCGGAAAGTTTTGAGCTTCTCGACTTTTATAACATAAATTCCTTATTAGATTTGGGTTTTTTTTTGTTTTGCTTCAGGCACTAATGTTCAGACTAATGAAGATGTTGCAATCAAACTGGTAAGTTGGTTTTTGTTTCATTCAATGCAACATTTAACAGTTCGTTCCCTTTACATGCTTAGAGCATGTAATTCGTCACTATAGTCTATAAATTTCAGATATGAGATATGTATTTTAAGTATTGATATCTATATTATGTAGAGTATGCTAGAGGAAGTAATATATGCAAGGGTAATATTGATTTTATTCTAGTATAGTTTCATTACAGCAGATTAGATTTAAATAAACTCTGTGATATCCTTACAGCCTAGCTTGAATTATTCTCTATGATTAATCAACGGTTCTAATTACGGTTTTACAATAAATTTTAATCAGGAAAGTGTCAAGACAAAGCATCCTCAATTGTTATATGAATCAAAACTCTACAGAATACTGCAAGGAGGAAGTATCAATCTCTCTTTTCTTTCAAGCCTATATGAAATACTATTTTTATATTGCATTTTCAGTTTCTTATGGTTCCTTTGTTTATGCTGATTTTGCAGCTGGGATTCCGAATGTTAAATGGTTTGGAGTCGAAGGAGAATATAATGTACTCGTGATTGATTTGTTAGGACCCAGTCTTGAAGACCTCTTTAATTTTTGTAATAGAAAGTTCTCGTTGAAAACTGTTCTGATGCTTGCTGATCAAATGGTATGATTTATATGTTTTTTCTTTCTTCTGAACAGCGAATTACCAAAACAGGCTGATTTATCTATTTTATTCTATCAATTATGTTTTCTTCACAGATAAACCGAGTTGAGTTTGTTCATGCAAAATCTTTTCTGCATAGAGATATTAAGCCTGACAATTTTCTTATGGGTTTAGGGAGGCGAGCAAATCAGGTCAACTCAACTTAAATATAGTCCACTTTGCAGTGTTCCAGTAAATACTTATGTCTTATTTGACAATGTGTTGATGCATCTCTTACAGGTGTACATTATTGACTTTGGCCTTGCAAAAAAATATAGGGATTCAAGTCACCAGCACATACCATATAGGTAAAGATATATAAATGATTAGTTGCATTTATGGCTACGTAACTTGTGTTTTAGGGACTTAGTTTCATGCTTTCGCATTTTATAGGTTGATGCACTGAAGAAGTTCAGTTACCAATAGAGTTTTACCAATTTCATGTCGAATTTACAGTGTACCAACTTTTAGAAATGTTGGGCTCATGTTTTTGCTGGTGATTTTAAGTATGCTAATAACTTAGTAAGACAATATGGCTTATTCATATGTTTTATATTCAGTGTATTTGAGATATTGCGTGTGAGTACATGTAAATGAGCCCGTACCTAACTTCAAACGCTTGCTGATCCGTTGTTTTATCATTTGTTATGTAATAGGTTGTTTTGCAGCATAATGTTCATACGTTTTAATACTCTTAATTTGCTTACCTTAATTTATATTTGTCCTTTTAAGGATACTTATTCAGTGCTTAAATTCTGCATTTTTTAATGTGGTTAATCATATGGTTATGTACATTTAGTTACTTGGAATCATGTGTGCACTAACAAACATGTAATGCTGCAGAGAGAATAAAAACTTGACTGGTACAGCAAGATACGCAAGTATGAACACTCACCTTGGTATAGGTAGGTGCATCAACTCAGAGAAATAGCTAATACTATATGTACTGTTCATGTGAGCATCTATTTATGCATATGCCAACGTATTGTGGTGTCATTTTTATACAATGACTTGAGTTCGCTTCATTGATAGAACAAAGCAGAAGGGATGATTTGGAGTCACTGGGATTTGTTCTCATGTATTTTTTAAGAGGAAGGTGAAATTTCCCGCTAATATATTTTTATTCTCCTTGCAATATTATTATATGAAACTATAAATGTCACATTATCATTTTCAGCCTTCCTTGGCAAGGTTTACGAGCAGGGACAAAAAAGGAAAAGTATGAAAAAATCTGCGAGAAAAAAGTTTCCACGTCAATAGAGGTGTGGTTTTATGCATATTGAAGGTGTCAGTTATTATATTACTAGACATGTCCAGTGATTCGTTGACAATCAAATTGATATACTGTTTCAGGCTTTATGTCGTGGATATCCTACTGAATTTGCTTCATACTTCCACTACTGCCGCTCGCTTCGTTTTGATGACAAACCAGATTACACATACCTTAAAAAATTGTTCCGTGAACTATTTATACGAGAAGGTAGATTTCCTCAAATTATATTCATTTCCGGTTTAATATGTATTGAACAAATACCTATTTGTCATCATACAGGATTTCATTTCGATTATATTTTCGACTGGACCATTTTGAAGTATCAGCAAGCACAGAATTCTAGCACTCCACCTCGACCAATGTTGAGTCAGGTACAGTGCATTCCTTTTCCTTTTCTTGCTTCATTTTATTAAGTTGCTTATTTTCTATTTTCTCTGTAGAATCATGGAGCTGGACCTAGTACTGGTTTGGGTGCACCATTTGGCAGGGATAGGGCTTATGGTAAATGATGTTTACTTCCTTGTTATCTTAATCAGAAAGATATCTTATGTTATACTAGTATAAACCGCACATATGTTCATCTAGTAGCTAGAGCGAATGTGTGTTGTAAGTGCAGAAGTTTTGGTAATCACAACGCTTTTATTTCAAGTTATTTTGTTGGTGGTGTCGGTGGCAAATTGGTAGTAAAATTCCGTTGATGGGTAGTTGAGAATGGATGGTGGATGTTGCAAACCGATGGTGGATTTCCATTGATGGATAATGGTATTTTCGGAATTTCAAAAAGACACCGTGGAAATGCTAGTCGTTGAATTCTCTTTATAAGTAGTAAAGATAAAGATAAAGGTAAAGGTAAAGATATACATGGAGGTTATATTGCACCAAACCACTTGCTTCACGACATTCTAATTTAGATAAATTTGAGAAGGAAAGGTGTGGACATCAGTGCAATAGTTACTAAGTATGAAGTCAAAAAAGGGGCAAAGCCCTTTGATATTCACATGTGGATACCTTTATGCTGTATGACAAGAAATGAGAGGGTTTCTTGCAATTTTAGGCTTACAGTGACAGAGAAACCACAAGTTTCATCACGTCTCCCACTTCGCATATTTCTTAGAGTTTTACTTTTATATGTTTCATCTAAAATTTTCTTCATGAATTTAAAAGGCGGTGAAGAAAGGAGAACTGGTGGTTTGCCAGTAGATCCCAATCGTGTACGTATGCCAGCAACGGGGATTGGAGGCAGTCTATCAAAACAGAAGAATCCACTAGCAACAGATTCTACATCGACCAAAGAGGCCATGGTTAGTTTGTTCTTTGTTTCCCTTCCATGTTTTGGTACATATTATTCAGACTTTAATTGTGCTAGAAGTGTTCAACCTTGGTTTGAAGGAGAACCTTCTTACTGTTGCAAGTTAATGTCATAGTTTATCTTGTAAGATCACGAAGAGTTTGAGCAGAGAGGTCAAACAAGGGGAAGAATTATGTTGTTGCTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATGGGTTAGGATCGGCTGCTCCTCAAATCCGCCTGATTTCAACCACATGTTTCGAACCTTGTTTGATTTCATTTCATTGCAAGTGTGCTCCAATTGCAAATCCTCAAAATTTCACTGCAATTTGTATCATTTGATATGAAGTCAACTGAGAATTATACTTGTCCTTAAGTTGCTTCAAGCCTTCATGCCATTCTATTTCATTGCCATCAATAGCAGATTATGAAATATGATTGAGACTTTTCAGGGTTAAACTGGCCCAAAAATAACTGTTTCTGCCTTTGAATTTCATGTAAATATCAGCAGTGTTGTTTTCAGTTGCTTCTTTTTAGAGAAATCTCTATTTCAACTGATTTAGGAATGCATAACTTTGTTGTTGAAGAAACTTAAAATGCAAATGTTAATATGACTCCTTCTGTGCAGGCTTCAAATTATGGGGGGCGGTCAGGAGAGTCTTCAAGACGAGCTGTTTTTTCTAGCAGCCGGGACTCAACACCAATTGCTTCAGCAGAGCAACAACATATGAGAACTTCTTCAAGAAGACCCGCATCCAACATCAAATATTATGACTCTGCCCTGGAAGGCATTGAAGGCCTTCATCTCAACAAGGAATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020105707.1	1.4e-151	casein kinase 1-like protein 2 isoform X1
Swissprot	Q9CAI5.1	4.0e-138	Protein CASEIN KINASE I-LIKE 2
trEMBL	A0A6P5GCV8	1.0e-151	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G72710.1	63.81	4e-146	514	CKL2	casein kinase 1-like protein 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G04149	AT1G72710.1	409	109	5	67	441	62	465	63.81	4e-146	514
AfisC6G04149	AT5G57015.1	380	120	6	67	444	62	430	65.00	2e-139	492
AfisC6G04149	AT4G26100.1	393	121	8	67	444	62	446	63.36	6e-138	487

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	93	233	62.9	2.7e-17

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000086	P	G2/M transition of mitotic cell cycle
GO:0000156	F	phosphorelay response regulator activity
GO:0030529	C	intracellular ribonucleoprotein complex
GO:0004001	F	adenosine kinase activity
GO:0004017	F	adenylate kinase activity
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004673	F	protein histidine kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004712	F	protein serine/threonine/tyrosine kinase activity
GO:0005507	F	copper ion binding
GO:0005524	F	ATP binding
GO:0005654	C	nucleoplasm
GO:0005774	C	vacuolar membrane
GO:0005794	C	Golgi apparatus
GO:0006169	P	adenosine salvage
GO:0006281	P	DNA repair
GO:0006364	P	rRNA processing
GO:0006897	P	endocytosis
GO:0008360	P	regulation of cell shape
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009553	P	embryo sac development
GO:0009640	P	photomorphogenesis
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009741	P	response to brassinosteroid
GO:0009785	P	blue light signaling pathway
GO:0009850	P	auxin metabolic process
GO:0010087	P	phloem or xylem histogenesis
GO:0015631	F	tubulin binding
GO:0018105	P	peptidyl-serine phosphorylation
GO:0019200	F	carbohydrate kinase activity
GO:0046686	P	response to cadmium ion
GO:0030178	P	negative regulation of Wnt signaling pathway
GO:0032091	P	negative regulation of protein binding
GO:0032436	P	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032922	P	circadian regulation of gene expression
GO:0042752	P	regulation of circadian rhythm
GO:0042803	F	protein homodimerization activity
GO:0043622	P	cortical microtubule organization
GO:0044822	F	poly(A) RNA binding
GO:0046777	P	protein autophosphorylation
GO:0046835	P	carbohydrate phosphorylation
GO:0048046	C	apoplast
GO:0048364	P	root development
GO:0051510	P	regulation of unidimensional cell growth
GO:0055028	C	cortical microtubule
GO:0071542	P	dopaminergic neuron differentiation
GO:0080094	P	response to trehalose-6-phosphate
GO:0080117	P	secondary growth
GO:0090263	P	positive regulation of canonical Wnt signaling pathway
GO:1903827	P	regulation of cellular protein localization
GO:2000052	P	positive regulation of non-canonical Wnt signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network