Detail information of AfisC6G04305


Location
GeneChrStartEndStrand
AfisC6G04305chr6768772328768775765-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020267699.15.0e-108B-box zinc finger protein 22-like
SwissprotQ9SYM2.23.3e-56Protein SALT TOLERANCE HOMOLOG 3
trEMBLA0A5P1EUX43.4e-106B box-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G78600.145.485e-61 231BBX22;DBB3;LZF1;STH3light-regulated zinc finger protein 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag373719.t1
Allium fistulosumAfisC6G04305
Allium sativum
Arabidopsis thalianaAT1G78600.1; AT1G78600.2
Oryza sativaLOC_Os06g05890.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00643.21zf-B_boxDomain549532.85.2e-08

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0003712Ftranscription cofactor activity
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0007623Pcircadian rhythm
GO:0008270Fzinc ion binding
GO:0009651Presponse to salt stress
GO:0010100Pnegative regulation of photomorphogenesis
GO:0048573Pphotoperiodism, flowering
GO:0080167Presponse to karrikin
GO:0090351Pseedling development
GO:1902448Ppositive regulation of shade avoidance

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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