Detail information of AfisC6G04510


Location
GeneChrStartEndStrand
AfisC6G04510chr6815137175815159232+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265049.11.2e-267serine/threonine-protein kinase STN7, chloroplastic
SwissprotQ9S713.12.2e-231Stt7 homolog
trEMBLA0A5P1EVN01.6e-263Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G68830.176.990.0 851STN7STT7 homolog STN7

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag307226.t1; g418609.t1
Allium fistulosumAfisC6G04510
Allium sativumAsa8G02753.1
Arabidopsis thalianaAT1G68830.1
Oryza sativaLOC_Os05g47560.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain12444281.36.7e-23

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0000307Ccyclin-dependent protein kinase holoenzyme complex
GO:0004674Fprotein serine/threonine kinase activity
GO:0035556Pintracellular signal transduction
GO:0005524FATP binding
GO:0006259PDNA metabolic process
GO:0006468Pprotein phosphorylation
GO:0006974Pcellular response to DNA damage stimulus
GO:0006996Porganelle organization
GO:0044772Pmitotic cell cycle phase transition
GO:0007275Pmulticellular organism development
GO:0007623Pcircadian rhythm
GO:0009535Cchloroplast thylakoid membrane
GO:0009643Pphotosynthetic acclimation
GO:0010033Presponse to organic substance
GO:0010468Pregulation of gene expression
GO:0010564Pregulation of cell cycle process
GO:0015630Cmicrotubule cytoskeleton
GO:0034645Pcellular macromolecule biosynthetic process
GO:0042549Pphotosystem II stabilization
GO:0044430Ccytoskeletal part
GO:0044702Psingle organism reproductive process
GO:0044843Pcell cycle G1/S phase transition
GO:0048519Pnegative regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0051301Pcell division
GO:0080090Pregulation of primary metabolic process
GO:1901700Presponse to oxygen-containing compound

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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