result

Gene information

Detail information of AfisC6G04567

Location

Gene	Chr	Start	End	Strand
AfisC6G04567	chr6	823711467	823714315	-

Sequences

CDS

>AfisC6G04567
ATGTTGATTCTTAGTGGAAGCAGTCGAGCCTACGGATTCGATTTAGACCTCATAAAATCCGCATCTCCTTCTATATGTTCTTCTTCATCTTCCCCTGCCTCTACACTTTCAGAAAATTCAAATTCCTCTTACACAATATCAACAAAAAGAGCCAGAACACCTAGAAAGAGGCCTAATCAATCGTATTCAGAAGCTGCAGCACTTCTTTCTACTATAAATCCTACGCTCTTTTCCTCAAAAAATCTACACAAATTCACTAAACATTCAAAACCATTTTCTTCTTTGTCACCTTACTCGGTACTTAATGAAGTTAGCTTACTCATTGAAGACTCATCTCCTTGTCATCATAAACCTTCGTATCAGTTTGAACTTAAATCAACTAGCTCAAACGAGAAATCGTGCACTGATTATGAAGCGCCCGATTCATTTTCGGATTATGACGTGGAGTCAATTCTTAATGAAGTTGGTGAAGGAATAGATAGCATTATGGGAAATTTAAGCATTGATAATTATAACACAAATTCTACTTCTTATATTGATTCATGTATTGGAAGTTTGACGGGAATAGGAGTCAGTAGAAGTTGTATAGGTAAAGCAATTCGTGCTACCCATAATGGAGATTGGTGGAAGCCCATTACTCAAGTTAAGTTTCAAGATATTGTACCACAATTAAAAGCAAAGAAGAAGAAAAAAAGCAAGAGTAAGAAGGTGGAGAAGGATGTGGTGAAAATCGAGTCTAAGTTTAATAGCAAAAGCAGAATACCTGCTACAATTACAAATGGTTCTAAGTGTTGTGAAAATTTAGTAGATGAAGTATCGAAATGTGGTTTGGGTCTGAGATTAAACCACGAAGCTGTGCTCGAAGCTTGGTCAGAAAATAAGTTTCCTTTTACCAATGAATCAGGCAAAATTGAATCATCTGCTGATATTCATGCTAGGCTTTCCGAAATTGATTTGATACCGGATGATGAAGATGAAAACAGAGAAGTGGGTGGTCGAATATACAAAGAAAAAAGAAAAAACAAACTCAATTCTTCCAACACAAGAAAAATTCGATACCAAGTTCGGAAGGTTAATGCTGATTGTAGGCCAAAGATGAAAGCAAGTGGCCGCTTTGTTAGGAGTCCCGACCTTGTTCAACAAACCGTGGAAGGAGAAAACCAATGA

Protein

Gene

>AfisC6G04567
GTGAAACTAAAACTTGGAAAACAAAATCTCTGAAATAAACTATAACAGCCTGCACAGACGCCCGGCTGATGAAAGTGAAACTTGTCTCATCCTCTGTTTCATTCCTTTCACAAATAAAAAACTCTCTTCATTCATTCTTGAATTCTCCATTACCTTTCTTCTTTCAATAACTTCATTTCTCCGTTTTGCTTCTTACAACTAAATTATTTTGTCCTTTGGAATTCTGGCTCTTTTCTTTACATTTCTTTTTCTTGGTTTGCTTTCTCTTTTCTTTCTCTTTTGCAGTACTTGCTCTTGTTTGTTGCATCGAAACAGAGTTTGGATTCTGATACTTTTTCAGCAACTAACATTTCATAGTTTTTACTAACTTGTCCCATTATTTATGTTTTTGATGCAAAAATTGTTTCTTGGTGCTTATTTTGTAGCCTTTTGGGCATAGAAGAAACCATTGCTCATTGGATTGTCTTCCGTTTGAGTAAAGTTGTTCTTGAAGAACCACTTTGGTGAGTTGGGTTTTCAACATATATTTTTAATCAAGTCTTAATTACTGGTTAATCTTCAAAAACTATGACAGTATAAGCTGGTTGAGGTTTTAAAAGGGTTTTACTGGCTGTTAGGATTTTCAATTTTTATCAAAAAAGATTTAATTTTGATGGATAGCCAGATAAATTCTCATGAATTCAAACCTGGGTTTTGAAAGTTCCTCCGTTTGATGAATTATTATCTATAATTCAGTGCTCTGAATTTTAGGGTTTAAAGTTTTAACATAGAATTATTTCCCAATTTTCACATGTCAACTTCAAAATAAACTACACTGTCACAAAATTTCTGTAAACATACATAATGTTGATTCTTAGTGGAAGCAGTCGAGCCTACGGATTCGATTTAGACCTCATAAAATCCGCATCTCCTTCTATATGTTCTTCTTCATCTTCCCCTGCCTCTACACTTTCAGAAAATTCAAATTCCTCTTACACAATATCAACAAAAAGAGCCAGAACACCTAGAAAGAGGCCTAATCAATCGTATTCAGAAGCTGCAGCACTTCTTTCTACTATAAATCCTACGCTCTTTTCCTCAAAAAATCTACACAAATTCACTAAACATTCAAAACCATTTTCTTCTTTGTCACCTTACTCGGTACTTAATGAAGTTAGCTTACTCATTGAAGACTCATCTCCTTGTCATCATAAACCTTCGTATCAGTTTGAACTTAAATCAACTAGCTCAAACGAGAAATCGTGCACTGATTATGAAGCGCCCGATTCATTTTCGGATTATGACGTGGAGTCAATTCTTAATGAAGTTGGTGAAGGAATAGATAGCATTATGGGAAATTTAAGCATTGATAATTATAACACAAATTCTACTTCTTATATTGATTCATGTATTGGAAGTTTGACGGGAATAGGAGTCAGTAGAAGTTGTATAGGTAAAGCAATTCGTGCTACCCATAATGGAGATTGGTGGAAGCCCATTACTCAAGTTAAGTTTCAAGATATTGTACCACAATTAAAAGCAAAGAAGAAGAAAAAAAGCAAGAGTAAGAAGGTGGAGAAGGATGTGGTGAAAATCGAGTCTAAGTTTAATAGCAAAAGCAGAATACCTGCTACAATTACAAATGGTTCTAAGTGTTGTGAAAATTTAGTAGATGAAGTATCGAAATGTGGTTTGGGTCTGAGATTAAACCACGAAGCTGTGCTCGAAGCTTGGTCAGAAAATAAGTTTCCTTTTACCAATGAATCAGGCAAAATTGAATCATCTGCTGATATTCATGTAAGTTTCTAAATTTGATATATTCATATTATGCATATATATAGATATTATAAAGTCTACGGAGTATCTACTGCCAAATCTGTGATATCTTTGTTTACGTTTTTAATCTATCAAACAAAATACCATTGTTTGTGGTCCTTCAAAATTTTAACATCCTGTAAGCTCAATTATGTAGTTTCCAGTGTTTATTGTGGATGTAATATATTTTTTGACAAGGATAAATTTTGTGGTCCTATAACCTATTAGTAAAATATACACATTATAAACTTTCTACTTTAGTCCCATATTTTTCTTCTCTATTCATTATGTATTTTCAGATACAAATTTTACATCTAACTTGATTGTTTTGGTAAGAGATAAACAGAGCTAGTGTATGTATATGTGTGCATACTTGCATATACACTGGGTATCTGTGCACAATATAGTGCATATGATATCAAATTAGTTTATATGCATCGTATTAGAATATCTTTGTTTTTCCATAATGACTAAATTCGATCTGTTTGGTTTTCCTGTGGTGTTTAACTATTTAACAGGCTAGGCTTTCCGAAATTGATTTGATACCGGATGATGAAGATGAAAACAGAGAAGTGGGTGGTCGAATATACAAAGAAAAAAGAAAAAACAAACTCAATTCTTCCAACACAAGAAAAATTCGATACCAAGTTCGGAAGGTTAATGCTGATTGTAGGCCAAAGATGAAAGCAAGTGTAAGATTTCCTCTGAAATTCTTTTTGTTTATATCTTTTTAGTTCGGCCTTCTGAGAGAGATAAAAATCATCAAAAAAAGGCGATTTTAAATAAATAAACTTCCATGTTAATGCATTACTTCTACATACACATGTAATTACCACTATATGATTTATTTACTGCAGGGCCGCTTTGTTAGGAGTCCCGACCTTGTTCAACAAACCGTGGAAGGAGAAAACCAATGAACACTTAAAGACTGAGACGATGTTTTGGATATTGAAGAAATTTTGTGAACGGTTTTAGGTTTGAGTTTCAGAAATTTTGTGAAAGCATATAAATGTATCAAATTTTGCCTGAATGCTATGTAGTTTTATGTGTTTTTA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264585.1	1.1e-75	LOW QUALITY PROTEIN: protein CHLOROPLAST IMPORT APPARATUS 2-like
Swissprot	Q9LU68.1	7.4e-24	Protein CHLOROPLAST IMPORT APPARATUS 2
trEMBL	A0A5P1FMT8	2.7e-71	Protein CHLOROPLAST IMPORT APPARATUS 2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G25990.1	36.70	4e-38	155	CIL	CCT motif family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G04567	AT4G25990.1	406	200	18	7	377	2	385	36.70	4e-38	155
AfisC6G04567	AT4G25990.2	419	202	18	7	377	2	400	35.56	1e-36	150
AfisC6G04567	AT5G57180.2	432	206	18	6	377	10	427	35.19	3e-35	146

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF06203.11	CCT	Motif	335	375	29.0	7.7e-07

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network