result

Gene information

Detail information of AfisC6G04596

Location

Gene	Chr	Start	End	Strand
AfisC6G04596	chr6	828531727	828534947	-

Sequences

CDS

>AfisC6G04596
ATGCGCCATCTTTCCCTGAAAAGCCGAAGCCTGAAGCGCCTGTTCATCGGCCACTGGCTAAACAAACCACCGCCATCAGCAACAGCAGTAGAAGAAGACGACGAAGTCTTCCAAGACGAGATTCTAATCGCGTCCCCTAGAAAGCCAAACTGGAAATGCTTCTCCTTCCACGAAATCCACCAAGCCACAAACGGCTTCCATCAAAACAACCTAGTCGGAAGAGGCGGATACGCAGAAGTATACAGAGGAGTGCTCCAAAACGGAACAAACATCGCAGTGAAAAGGTTAACAAACGCCTCCACCGACGAGCAAAGAGAGAAGGAGTTCCTGACCGAGCTCGGCACGGTCGGTCACGTCGACCATCCAAACGTTTCTGCGCTTCTCGGCTGTTGCATTGATCGCGACCTTCATCTGGTATTCGAATTCTCTTCTCTTGGTTCTGTCTCTACATGTTTACATGATCGGGGTTCGCCAGCAATGCCGTGGGAGGTCCGGTACAAGGTTGTGGTTGGGACTGCGAGAGGATTGCATTATCTGCATAAAGGGTGCCAGAGAAGAATCATACATAGGGATATAAAAACCTCTAATGTGCTTCTTACGACTGATTTTGAACCTCAGATTTCTGATTTTGGGCTTGCGAGGTGGTTGCCTTCTGAGTGGACTCATCGCGCTGTTGCGCCTATTGAAGGCACATTTGGGTGTTTAGCGCCGGAATATTTCATGCATGGGATAGTCGATGAAAAGACGGATGTGTTTGCGTTTGGGGTGTTCGTGTTGGAGGTTCTATCGGGGAGGAAACCAGTGGATGGGTCTCATAAGAGCTTGCTTAGTTGGGTTAAACCATATTTGAATAGTGAGATGACACACATTTTAGTGGATCCAAAATTGGGAGAGAAGTATAATGCTGAACAGTTAAAAAGACTCAGTTTCGTTGCTTCACTTTGCATTAGACCATCTGCAGCTTGGCGAGCTTCTATGACCGAGGTATTGAATTTAATCGAAGGTGATGGGATATTGCCTGAAACTTGGAAAATGCCAGAAGATGAAGACGAGGAAGAATTTTGGGGCTTCGATGACCTTGAAGATTGTGATATCGATGAATGTGAAAGCCCTACATCATCTTCATCATCTTTAAAAAGTTCTTAA

Protein

Gene

>AfisC6G04596
AATTATTTAAACTAAATTATTATTATTTTTTTAAAAAAACGTTTGCCTACAAGTTTCTAACAATAAATGTCTCAACTTTAGTTCCTAAACAAAGCCACACCATCACTGCTCTATTTGACTACTGTTTCATATTCCTCCAAAACCAAAAACGCTTTAACTCCTCCCATCTTCCCATCCAACACACATCGCAAAATCAGATAAAGCCATTTCCAAAAAATGCGCCATCTTTCCCTGAAAAGCCGAAGCCTGAAGCGCCTGTTCATCGGCCACTGGCTAAACAAACCACCGCCATCAGCAACAGCAGTAGAAGAAGACGACGAAGTCTTCCAAGACGAGATTCTAATCGCGTCCCCTAGAAAGCCAAACTGGAAATGCTTCTCCTTCCACGAAATCCACCAAGCCACAAACGGCTTCCATCAAAACAACCTAGTCGGAAGAGGCGGATACGCAGAAGTATACAGAGGAGTGCTCCAAAACGGAACAAACATCGCAGTGAAAAGGTTAACAAACGCCTCCACCGACGAGCAAAGAGAGAAGGAGTTCCTGACCGAGCTCGGCACGGTCGGTCACGTCGACCATCCAAACGTTTCTGCGCTTCTCGGCTGTTGCATTGATCGCGACCTTCATCTGGTATTCGAATTCTCTTCTCTTGGTTCTGTCTCTACATGTTTACATGATCGGGGTTCGCCAGCAATGCCGTGGGAGGTCCGGTACAAGGTTGTGGTTGGGACTGCGAGAGGATTGCATTATCTGCATAAAGGGTGCCAGAGAAGAATCATACATAGGGATATAAAAACCTCTAATGTGCTTCTTACGACTGATTTTGAACCTCAGATTTCTGATTTTGGGCTTGCGAGGTGGTTGCCTTCTGAGTGGACTCATCGCGCTGTTGCGCCTATTGAAGGCACATTTGGGTTGGTTAATTAGTTGCTTGCTACTCCTATGTTTTACTTGGTATATTTATGTTAACAACACTGAAGTTTATTGATGATTGCTGCCAGGTGTTTAGCGCCGGAATATTTCATGCATGGGATAGTCGATGAAAAGACGGATGTGTTTGCGTTTGGGGTGTTCGTGTTGGAGGTTCTATCGGGGAGGAAACCAGTGGATGGGTCTCATAAGAGCTTGCTTAGTTGGGTAATCACACTATAATTTGTTACAGTCTTCAACATTTTTACAGAATCAATACTGATTTTATCTTTACTTTATGATTGAAGGTTAAACCATATTTGAATAGTGAGATGACACACATTTTAGTGGATCCAAAATTGGGAGAGAAGTATAATGCTGAACAGTTAAAAAGACTCAGTTTCGTTGCTTCACTTTGCATTAGACCATCTGCAGCTTGGCGAGCTTCTATGACCGAGGTAATTTCCTATTTGATTGCAGTTTTGTTTTATTTTATGTTTTATTAATGAGAAAAAATTCTAATTACTTTTTAAAACGTGCTGAGGAAATTAGAAGTCTCTTTCCTAGTTATAAATCTCGGGTGAAATGTCAAATACATGTAATTTGGTGGCAACAATTGTCATTATCAAAATTAATTTAAGTCTGATGACCTTTTCCATTAGAGTAAAAATTAGATTATAATGTGCGTTGTTATAGTTGTGTAGGAATCAAATTGTTTTCTCCTTTTCCTTGAATGTGCAATTTGGTAAACATTGAATTCTGTTTTGATCAGCTCTTGAACTTACTTTTGTATACATACAAATAGATATTTCTGAACTAACAATTATCTCTTTTAAGTATTAACGTGGACAAAATAGACATGGTAGCATTGGTAGAGCACAGCTGTATACATCCTCTTATTATACAAAAGTATGACGTACACTACCATCTGATTAATGACTACTTGCTACAAGAATTATTATTATTATACCATAGTATTAAGTATTATAACCAATACTGTATGCTGTATTGTAGCTTACCTATATTGAGTTCAAAATATTAGACATAAAATGTACCGTAAAAATGCATCTGATAAATTACAAGTTTACTATGTAATGTGTATTAAGTTCCGACATATTTATATTCTTAGACAAAAGTACTATTACATATAGCTTGTTGGACAAGTATGCTATAAAGAAGCGTGGAAAATTCCAAAAAAAGGGTACGCCATCGTTCTGTCAACTTTTTGTAATACAGTAACAGGTCAGCTTAGCTAGCTAGCAGTCGAAAGGAACATTAATTCTATTTTGCACATACTACAACGAGCCGTGTCTTTTAAACTGTATGCTCTGGAATCAGTATATCGAAACTAATCCTGCTAATCTTTTATGATACTTCGCTAGAAAAATATATAATTTCAGTAGACGGCAGTCAAATTTAACATGGCAAATGAAAATGTCCCTATGACTCAATATCAAATGCTAGTTTGGCCAGTTATACAATTGGGCGTTTATATTTTAGATCTCCTGAAAGTCACGGATTAGCTCATGATAGCTATATTTTTATTGCATGGTAGGTCAGAAATGTGGTTATAAAGATTGAAAGACAAGAGATTCTAACACATGCATCTACTATTAGTTTTAACTTTTAAAGCTGTTAGGAATAGAGAACGTTAATTATTTTATAAGCTAGAAAAACTAGCTTATCAAGTTAATGCATTTACACGACACACGTCAGTCTCTTTATCTAAGGATTTTGTAGAATTATAATATTACCTTAGTCGTATTTTTATGATCATCATGCAATAACGACAAATTGAAATACTGTGACAGGTATTGAATTTAATCGAAGGTGATGGGATATTGCCTGAAACTTGGAAAATGCCAGAAGATGAAGACGAGGAAGAATTTTGGGGCTTCGATGACCTTGAAGATTGTGATATCGATGAATGTGAAAGCCCTACATCATCTTCATCATCTTTAAAAAGTTCTTAAGTAATTATAAAATTGCATTTACGTAGCTAGCATTGTCAAGTTTTATGTGTAAAATATTTAGTTAGCTAAATTGCCCCTCGAGGGTGCAAGGCTGAATGTATATATAAAGCACCATCTTGTGTCAAAGGGGATTTTTGAAGTGCTGTTTCTTTACTCCGCATTGATTACCTTTCTAATTATTTCAGCCATATGTACCACAAAGCCATAGTTAATATGATTTGGAAGTATATATAAAGTTACTTTATTGAAATATTAATTGAGTTCAGAAAGCAAGAAAAAGGCGAAAATGAACATGAATGAGATATGTTACCTCATATATAATGTAGTTGGAGGTAGTTG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020673458.2	1.4e-150	probable receptor-like serine/threonine-protein kinase At5g57670
Swissprot	Q5XF57.1	2.8e-100	Probable receptor-like serine/threonine-protein kinase At5g57670
trEMBL	A0A8T3BFF7	4.4e-151	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G18890.1	57.89	3e-120	428		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G04596	AT2G18890.1	380	144	6	6	375	4	377	57.89	3e-120	428
AfisC6G04596	AT5G57670.2	302	137	1	48	347	249	550	53.97	1e-100	363
AfisC6G04596	AT2G18890.2	269	90	4	6	265	4	269	62.08	3e-94	342

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	68	274	133.3	8.1e-39

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005829	C	cytosol
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005634	C	nucleus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0009556	P	microsporogenesis
GO:0009623	P	response to parasitic fungus
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009814	P	defense response, incompatible interaction
GO:0010152	P	pollen maturation
GO:0012505	C	endomembrane system
GO:0019901	F	protein kinase binding
GO:0033612	F	receptor serine/threonine kinase binding
GO:0046777	P	protein autophosphorylation
GO:0051020	F	GTPase binding
GO:0071369	P	cellular response to ethylene stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network