result

Gene information

Detail information of AfisC6G04607


Location
GeneChrStartEndStrand
AfisC6G04607chr6829783216829783712-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrOAY79806.13.8e-20Zinc finger protein 2
SwissprotQ39261.19.7e-13Zinc finger protein 2
trEMBLA0A8K0N9W12.7e-20Zinc finger protein 7

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G57520.138.931e-1475.1ATZFP2;ZFP2zinc finger protein 2

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Ortholog group
SpeciesGenes
Allium cepag39239.t1
Allium fistulosumAfisC6G04607
Allium sativum
Arabidopsis thalianaAT5G01860.1; AT5G57520.1
Oryza sativaLOC_Os02g35460.1; LOC_Os08g44190.1; LOC_Os09g26210.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13912.3zf-C2H2_6Domain335625.86.8e-06

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding
GO:0009640Pphotomorphogenesis
GO:0009736Pcytokinin-activated signaling pathway
GO:0009740Pgibberellic acid mediated signaling pathway
GO:0009910Pnegative regulation of flower development
GO:0010091Ptrichome branching
GO:0010582Pfloral meristem determinacy
GO:0044212Ftranscription regulatory region DNA binding
GO:0019760Pglucosinolate metabolic process
GO:0022626Ccytosolic ribosome
GO:0042752Pregulation of circadian rhythm
GO:0043565Fsequence-specific DNA binding
GO:0046982Fprotein heterodimerization activity
GO:0048579Pnegative regulation of long-day photoperiodism, flowering

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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