Detail information of AfisC6G04732


Location
GeneChrStartEndStrand
AfisC6G04732chr6847918433847932172-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020264245.10.0e+00LOW QUALITY PROTEIN: auxin response factor 19-like
SwissprotQ0D9R7.20.0e+00OsARF7a
trEMBLA0A8K0I1030.0e+00Auxin response factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G19220.177.800.0 694ARF11;ARF19;IAA22auxin response factor 19

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag379527.t1
Allium fistulosumAfisC6G04732
Allium sativumAsa8G02548.1
Arabidopsis thalianaAT1G19220.1
Oryza sativaLOC_Os02g04810.1; LOC_Os06g09660.1; LOC_Os06g48950.1; LOC_Os08g40900.1; LOC_Os08g40900.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family13023172.51.9e-20
PF06507.10Auxin_respFamily256339116.73.7e-34
PF02309.13AUX_IAAFamily961104834.32e-08

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0010467Pgene expression
GO:0034645Pcellular macromolecule biosynthetic process
GO:0044238Pprimary metabolic process
GO:0044271Pcellular nitrogen compound biosynthetic process
GO:0050794Pregulation of cellular process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14486K14486, ARF; auxin response factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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