result

Gene information

Detail information of AfisC6G04817


Location
GeneChrStartEndStrand
AfisC6G04817chr6863832501863833112+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_019710028.18.3e-25mini zinc finger protein 2-like
SwissprotQ9LJW5.11.4e-21Mini zinc finger protein 2
trEMBLA0A6J0PQN15.9e-25mini zinc finger protein 2-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G28917.157.619e-2298.2MIF2mini zinc finger 2

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Ortholog group
SpeciesGenes
Allium cepag530196.t1
Allium fistulosumAfisC6G04817
Allium sativumAsa0G00543.1; Asa0G00544.1; Asa8G02476.1
Arabidopsis thalianaAT3G28917.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF04770.9ZF-HD_dimerFamily277697.05.1e-28

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005739Cmitochondrion
GO:0046872Fmetal ion binding
GO:0005634Cnucleus
GO:0009640Pphotomorphogenesis
GO:0009723Presponse to ethylene
GO:0009733Presponse to auxin
GO:0009735Presponse to cytokinin
GO:0009737Presponse to abscisic acid
GO:0009739Presponse to gibberellin
GO:0009741Presponse to brassinosteroid
GO:0009793Pembryo development ending in seed dormancy
GO:0010371Pregulation of gibberellin biosynthetic process
GO:0010431Pseed maturation
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0019760Pglucosinolate metabolic process
GO:0042803Fprotein homodimerization activity
GO:0043392Pnegative regulation of DNA binding
GO:0043565Fsequence-specific DNA binding
GO:0048509Pregulation of meristem development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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