result

Gene information

Detail information of AfisC6G04942

Location

Gene	Chr	Start	End	Strand
AfisC6G04942	chr6	881734872	881736806	+

Sequences

CDS

Protein

Gene

>AfisC6G04942
ATGTCATGGTTATGTGATGATACGGCTCTTGCCGTTGAAAATCATAACAATGAAGTCAAAGAAATCAATGTGTTCGATGTCGAGGAGGAAGAAGAAGACGACAACAACATCGGTGGTCCGTATCAAATCTATTCCCGTAGGAAAAAGATGGCCCGTGCGCAGGATGGAGTTTTAAAATACATGGTAAAAATGATGGACGTCTGCAAAGCAAAAGGATTCGTGTACGGGATCATATCCGAGAGCGGACAGTCCGTAACTGGCTCATCCGAAAGCCTTAAAGAGTGGTGGAAGGAGACGGTCCACTTCGACCGTGACGCAGCAACGAATCTATCCGCAAGCCCGGTTAAAACCGACCTGGTAACCTGTTTACCTGTGGTTGGATTGGTGTCGAACTTGGATGACCTGCAGGACCTGCAGGACAGCACGTTAGGGTCGCTGCTTTCGGCCCTTCTGCAGCACTGCAACCCACCGCAGAGGAAGTACCCATTTGAGATGGGCCTGGCCCCACCCTGGTGGCCCAAAGGGCTGGAGCCATGGTGGGGGGTGCAGGGGGACCATGCAAAGGCCAAGGGCCCGCCTCCTTATAGGAGGCCTCACGATCTGAAGAAGGCGTGGAAGGTGACGGTGCTTGTGGCGGTGATCAGACATATGGGCCCGGACCTAGAGAAGGTGAAGAGGCTGGTTTGGCAGTCCAGGAAGCTGCAGAACAAGATAAGCATGAAGGAGAGCGAGATATGGGCCCGGGTTGTGAGTAAAGAGGAGGAGATGGTAAAGGAGACGAATGGGCCAGGTGGTGATGGAAGGAGGAAGTGCGAGTTTGTTAGGGACTGTAACATGAACTTTGCTAAGAACAATAGTACGGATGAGGAGATCGAGAGGATGATTAAAGGTTATATGGCGTTGTATGATGATAAGGAAGTGGACATGGTGTTAGAGGATACGGAAACAGTGAAGGAATCGGGGTTGCTAGTGCATGGAGAAGAAGAAGATCTTTGGTATATTGGTCTTACTTGAAAGAGTGGGTTCAGGTTAATAGATTCTGTCTTTTGTTTAGGACATATGGTAAATCAAGTAGTTATGTTAGGGTGAGGTTAGTCTACTGTTAGCTGGGTTATGTATGCTTTAGGCAATGGTATTTATGTGGGTAGAGTAACTAGGAGTATTTTCGCTGATTTGTAGGTTAAATTGGTTTAGTTTATCTCAGTGTATGTAGTAGTCATGCAACGCATGTCTTTGTTCTAGGCTAAAGTTGGTTAAATTTGGCAAACACAAAGCACAAAGTGATGAAATGTGCGCGTCTTAACTGCTTTGTTCATCATTCATTCATTCTGAAATTATCCTAGCTTACAATTGGAGAATTTTTTTACATGTACTTAAATTGTGATTTTGAAGGACAAAGCACAACATGAACATTTCGATTATAGCTAACCCTTAAGTCAGTAAATGGAAATCTCAAAAATATGAAATTGTTGTGCATCTGTATATGAAAAACAGCTAAATCTTCGATATTAAAATAAAAGTACAAATACGGATACAAAGGCATCCGCATTCGAAAGTTATTCGTTCGATTTTTGTTCAGATTATAGCTTATATTATGTGTATTTTAACACAATAAAAGATATATATTCATTATTTTATTTAGTTAATGGTTTATATTGTACGCATTTAATATATATTAATCGATCAAAACTATTTATTTTCGTCATATTTGTTTATTTTTCTTTATTCTACCCAATTCACGAGATTGAAAAAAAACCATGTTAAAACAAAAAATGTCTATTTATGTTTCTTGATTTGTTGATCGTTAGCAGATAGGATAATTATCTGATATCTGACTGTGTTTACGAATGCGGATATTCGATATGCGAAATGTTGCGGATGCAGTTATAATACTATCCGCATCTGAAAGTATTTGTTGATATGTTTAATTGAACG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020255079.1	4.7e-70	LOW QUALITY PROTEIN: putative ETHYLENE INSENSITIVE 3-like 4 protein
Swissprot	Q10M41.1	1.6e-62	Protein MAO HUZI 6
trEMBL	A0A4S8ITS2	6.4e-69	ETHYLENE INSENSITIVE 3-like 5 protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G65100.1	58.96	3e-72	268		Ethylene insensitive 3 family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G04942	AT5G65100.1	212	85	1	45	254	91	302	58.96	3e-72	268
AfisC6G04942	AT5G10120.1	217	91	2	45	257	61	276	55.76	3e-69	259
AfisC6G04942	AT2G27050.1	222	95	3	42	259	85	303	54.05	4e-69	258

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04873.10	EIN3	Family	40	254	315.4	2.1e-94

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0001666	P	response to hypoxia
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009873	P	ethylene-activated signaling pathway
GO:0010182	P	sugar mediated signaling pathway
GO:0042762	P	regulation of sulfur metabolic process
GO:0071281	P	cellular response to iron ion
GO:0080167	P	response to karrikin

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14514	EIN3; ethylene-insensitive protein 3	EC:-	MAPK signaling pathway - plant	ko04016
K14514	EIN3; ethylene-insensitive protein 3	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network