Detail information of AfisC6G05089


Location
GeneChrStartEndStrand
AfisC6G05089chr6904453850904457638-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020244153.12.2e-49heat stress transcription factor B-1-like
SwissprotP22335.11.5e-39Heat stress transcription factor
trEMBLA0A6I9SNY31.2e-44heat stress transcription factor B-1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G62020.138.542e-45 179AT-HSFB2A;HSFB2Aheat shock transcription factor B2A

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag187437.t1; g356778.t1; g951.t1
Allium fistulosumAfisC6G05089
Allium sativumAsa0G00718.1; Asa0G03403.1; Asa8G02166.1
Arabidopsis thaliana
Oryza sativaLOC_Os09g28354.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00447.14HSF_DNA-bindFamily16105106.01.1e-30
PF02382.12RTXFamily15223319.80.00022

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0008356Pasymmetric cell division
GO:0042802Fidentical protein binding
GO:0010200Presponse to chitin
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0046686Presponse to cadmium ion
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09419HSFF; heat shock transcription factor, other eukaryoteEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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