Detail information of AfisC6G05605


Location
GeneChrStartEndStrand
AfisC6G05605chr6982818970982819999+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008781928.11.6e-24homeobox-leucine zipper protein HAT22-like
SwissprotP46603.21.7e-23Homeodomain-leucine zipper protein HAT9
trEMBLA0A834X4146.1e-26Homeobox-leucine zipper protein HAT22-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G22800.160.422e-27 119HAT9Homeobox-leucine zipper protein family

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag202888.t1
Allium fistulosumAfisC6G05605
Allium sativumAsa8G01627.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain6812261.83.6e-17

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009506Cplasmodesma
GO:0009641Pshade avoidance
GO:0009735Presponse to cytokinin
GO:0010218Presponse to far red light
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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