Detail information of AfisC6G05614


Location
GeneChrStartEndStrand
AfisC6G05614chr6985505550985516808-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020267700.17.1e-42high mobility group B protein 15-like
SwissprotQ9MAT6.16.0e-30Nucleosome/chromatin assembly factor group D 15
trEMBLA0A5P1EQT25.1e-42ARID domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G04880.132.143e-39 159HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag393076.t1
Allium fistulosumAfisC6G05614
Allium sativumAsa7G06430.1; Asa7G06431.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01388.18ARIDDomain5313568.55.5e-19

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0010197Ppolar nucleus fusion

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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