Detail information of AfisC6G05921


Location
GeneChrStartEndStrand
AfisC6G05921chr610434573251043502802-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020276451.15.5e-259calcium-dependent protein kinase 13-like
SwissprotQ8W4I7.29.6e-240Calcium-dependent protein kinase 13
trEMBLA0A5P1ECR55.2e-259Calcium-dependent protein kinase 30

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G51850.178.370.0 858CPK13calcium-dependent protein kinase 13

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag52526.t1
Allium fistulosumAfisC6G05921
Allium sativumAsa8G01465.1
Arabidopsis thalianaAT1G74740.1; AT2G41860.1; AT2G41860.2; AT3G51850.1
Oryza sativaLOC_Os01g61590.1; LOC_Os05g39090.1; LOC_Os09g33910.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain57315246.72.3e-73
PF13499.3EF-hand_7Domain36142336.64.1e-09
PF13499.3EF-hand_7Domain43149444.41.5e-11

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005509Fcalcium ion binding
GO:0005739Cmitochondrion
GO:0004683Fcalmodulin-dependent protein kinase activity
GO:0004698Fcalcium-dependent protein kinase C activity
GO:0035556Pintracellular signal transduction
GO:0005516Fcalmodulin binding
GO:0005524FATP binding
GO:0005634Cnucleus
GO:0009506Cplasmodesma
GO:0009536Cplastid
GO:0009651Presponse to salt stress
GO:0009738Pabscisic acid-activated signaling pathway
GO:0018105Ppeptidyl-serine phosphorylation
GO:0046777Pprotein autophosphorylation
GO:0080092Pregulation of pollen tube growth
GO:1901979Pregulation of inward rectifier potassium channel activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13412CPK; calcium-dependent protein kinaseEC:2.7.11.1 Plant-pathogen interactionko04626

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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