Detail information of AfisC6G06254


Location
GeneChrStartEndStrand
AfisC6G06254chr611001502411100159572+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrQFE32165.11.7e-59heat stress transcription factor
SwissprotQ0DBL6.18.3e-48Heat stress transcription factor 16
trEMBLA0A5J6SCZ81.2e-59Heat stress transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G24520.155.936e-53 204AT-HSFC1;HSFC1heat shock transcription factor C1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag312725.t1
Allium fistulosumAfisC6G06254
Allium sativumAsa8G01031.1
Arabidopsis thalianaAT3G24520.1
Oryza sativaLOC_Os02g13800.1; LOC_Os06g35960.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00447.14HSF_DNA-bindFamily3612599.98.2e-29

Gene Ontology
AccessionOntologyName
GO:0001666Presponse to hypoxia
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0006970Presponse to osmotic stress
GO:0042802Fidentical protein binding
GO:0009408Presponse to heat
GO:0009644Presponse to high light intensity
GO:0009737Presponse to abscisic acid
GO:0033554Pcellular response to stress
GO:0070887Pcellular response to chemical stimulus
GO:0032268Pregulation of cellular protein metabolic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09419HSFF; heat shock transcription factor, other eukaryoteEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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