result

Gene information

Detail information of AfisC6G06325

Location

Gene	Chr	Start	End	Strand
AfisC6G06325	chr6	1112491283	1112495606	+

Sequences

CDS

>AfisC6G06325
ATGTCCTCCGCATCTCCGCCATTAACTTCGCCAGGGCCTGTCCCCTCACCACCCGCACCTCCTGCTTCCTCACCGCCCACTCCGCCCGAATCCTCGCCTCCCGCACCACCGGTATCGTCACCTCCGATACCCTCACCTCCCGCGGATACATCACCGCCTCCGTCTGACACGTCGTTAACGTCGCCGCCACCACCAACGCCTGAATCTTCCTCGTCTACTCCATCATTCATTCCATCGAACTCGACACCTCCGACGAAACCGTCGAAATCGACGCCGTCGAATTCGCCGGAAACGACGACCCCGAGTCGGTCTCCGCCGTCTTCAACCTCTATTTCTACGCCTCTTGTGGTGGGGATAGCTGTTGGTGCAGTCGTCGTTTTGCTGCTTTTGAGTGTTTTTTGCTTTTGCTGTTTGAAGAAGAAGAAAAGGAGAAAGGGTGATACTTGGGCTAATCAGCCTCCGCCACCTCACCCTCCACTGCCTCTTAAAGATAACCCGTATGGAGCACAACCTACGCATTGGCAACAAAGTTTACCACCAGCAGCAGCTGAACATCATGTGCAAATGCCACCACAACCATTTCCACCTCCAAAACCACCTCAGTATACACCATCAAACTATTCAAACACTACACCTGTAATAAACAGCAGTGGTGGATCCGGGTCGAACCATTCTGGAGGATCCGAATACCCAATGCACCCACAGTCTCCATCTCCTTCATATGGGTTCTCCAAAAGCACTTTCACTTATGAAGAACTCCGGATGGCAACAGATGGATTTTCTGATGCGAATTTACTTGGATCGGGCGGCTTTGGTTATGTGCATAGAGGTGTGCTGCCTAATGGCAAAGAAGTTGCAGTTAAGCAATTGAAAGCTGGAAGTGGACAAGGAGAAAGAGAGTTTCAGGCAGAGGTTGAGATCATTAGTCGTGTGCATCATAAGCATTTGGTTTCTTTGGTTGGATATTGCATTTCGGGGTTGCAGAGGTTGCTTGTTTACGAGTTTGTGCCAAATAATACATTAGAGTTCCATTTGCATGGTAAAGATAGACCAGTTTTGGATTGGCCAATCCGACTAAGAATTGCTTTAGGATCTGCTAAAGGCTTAGCTTACTTGCATGAAGATTGTCACCCTAAGATTATTCATAGAGACATCAAAGCAGCTAACATCCTTATTGACTTTAACTTTGAGGCAAAGGTTGCTGATTTCGGGCTTGCAAAAATTGCATCTGAAAACAGTACCCACGTATCTACTAGAGTCATGGGTACCTTTGGATACCTTGCACCGGAATATGCTTCTTCAGGAAAGCTTACAGACAGATCTGATGTATTTTCTTATGGCATCATGCTTTTGGAACTAATTACTGGAAGGCGCCCTGTTGATTCACGTCATTCTTACATGGATGACAGTTTAGTAGACTGGGCGAGACCACTGCTTACACATGCACTTGATAGTGGCGTCTATGATTCTCTAGTTGATGAACGGCTTGGAAAGAACTACAATGCTAATGAGATGGCACGTATGGTAACATGTGCTGCAGCTTGTGTTCGCCACTCTGCACGGCGTCGGCCTAAAATGAGCCAGATTGTTCGAGCATTAGAAGGAGACGTGTCACTCGATGACTTAAACGAGGGAGTCCGACCTGGACATAGCAGAGTGTACGGTTCATACGACAGCACCACCGATTACGACTCAGGTCAATACAACAAAGACATGCAAAAGTTCAAGAAAATGGCGTTGGCAAGCAATACTTATGCAAGCAGCGCATACAGTGCACCAACCAGCGAATACGGCCTAAACCTCTCTGCCTCAAGCAGCGAGGGCCAACACACTCAAGAGGTCGAGTTGCTCGATTCAAAGAGAGACAGCCATGGAAAAATTTAG

Protein

Gene

>AfisC6G06325
GAAAAAATTGCATGTGCCAACCAGCGCAAGAATAGCACGACAAGAGAATGGGGCCGGCGGGACCGCGTTCCGGCGGGTCCCACCTGAGCCGTCGCCTTCCTCCTTCCTTTCTTTAGAATCAAAAAGCTCATTCAAGTGAATCAGTAGTCATCATCTTGTTCTCCATTTACCATGTTTTCGTCTTTCAAATGATTATACCATAAAATTACATTTGTTAGAATTTTCAAGCATTATTGATCGGCAATGTCCTCCGCATCTCCGCCATTAACTTCGCCAGGGCCTGTCCCCTCACCACCCGCACCTCCTGCTTCCTCACCGCCCACTCCGCCCGAATCCTCGCCTCCCGCACCACCGGTATCGTCACCTCCGATACCCTCACCTCCCGCGGATACATCACCGCCTCCGTCTGACACGTCGTTAACGTCGCCGCCACCACCAACGCCTGAATCTTCCTCGTCTACTCCATCATTCATTCCATCGAACTCGACACCTCCGACGAAACCGTCGAAATCGACGCCGTCGAATTCGCCGGAAACGACGACCCCGAGTCGGTCTCCGCCGTCTTCAACCTCTATTTCTACGCCTCTTGTGGTGGGGATAGCTGTTGGTGCAGTCGTCGTTTTGCTGCTTTTGAGTGTTTTTTGCTTTTGCTGTTTGAAGAAGAAGAAAAGGAGAAAGGGTGATACTTGGGCTAATCAGCCTCCGCCACCTCACCCTCCACTGCCTCTTAAAGGTTATATTCCTCTTTTTGCTTTTTTGACATTTTAGATCTGGATCTGAAATCAGTGTGAAAAAGGACAGCATTAGTAGGGTTTGTATTAGGGGCAATCAGATTAAATTTTGATGTAATGAACTAGGCCAAACGATTCTTGTTATTTATGGTTGTAGTAAATTTAAATGCTTAAATTGATATTTGGTAAGTGTAACCTGCAGTGCTAAAATCATACATTTCATCGAATTTAGATAACCCGTATGGAGCACAACCTACGCATTGGCAACAAAGTTTACCACCAGCAGCAGCTGAACATCATGTGCAAATGCCACCACAACCATTTCCACCTCCAAAACCACCTCAGTATACACCATCAAACTATTCAAACACTACACCTGTAATAAACAGCAGTGGTGGATCCGGGTCGAACCATTCTGGAGGATCCGAATACCCAATGCACCCACAGTCTCCATCTCCTTCATATGGGTTCTCCAAAAGCACTTTCACTTATGAAGAACTCCGGATGGCAACAGATGGATTTTCTGATGCGAATTTACTTGGATCGGGCGGCTTTGGTTATGTGCATAGAGGTGTGCTGCCTAATGGCAAAGAAGTTGCAGTTAAGCAATTGAAAGCTGGAAGTGGACAAGGAGAAAGAGAGTTTCAGGCAGAGGTTGAGATCATTAGTCGTGTGCATCATAAGCATTTGGTTTCTTTGGTTGGATATTGCATTTCGGGGTTGCAGAGGTTGCTTGTTTACGAGTTTGTGCCAAATAATACATTAGAGTTCCATTTGCATGGTACTTGTTGATTCCTTCTATTAAAATGCAAACCAATAGCATTTTTTGTGATGTTTTAACTTGAACTTCCGTCTCCTGTAGGTAAAGATAGACCAGTTTTGGATTGGCCAATCCGACTAAGAATTGCTTTAGGATCTGCTAAAGGCTTAGCTTACTTGCATGAAGATTGTAAGATTTTTTTAATCGTCTTAACACCTTTAGTCTATCATTTCCAGTATGCAAAGTTCTTTATATCTATTTGATTGCATTTATTTCTTGTTTTCTTATCTCTTACATAGTTGATACTATGATACATTTTTCAGGTCACCCTAAGATTATTCATAGAGACATCAAAGCAGCTAACATCCTTATTGACTTTAACTTTGAGGCAAAGGTACTTATATAGTCATATGCGCTTTTCCCCTTTCTTGGTTCTTTGAAAATCTGATCTTTTTAAGTTTGAGGTATAACAAACTGATTGGAAATGAAAACAAATTGACCATTTACTGGTGATTATTTCACAGGTTGCTGATTTCGGGCTTGCAAAAATTGCATCTGAAAACAGTACCCACGTATCTACTAGAGTCATGGGTACCTTTGGGTAAGAGATCAGTAGAGATATATAATGTATTTTCTTCTGTATGTTCTTAAATTTTATAGAATCATGTTTCAGTTTGGCCTTTGAATTATTGTTCTTACATTAGATCATTTTATTTTCATAGATACCTTGCACCGGAATATGCTTCTTCAGGAAAGCTTACAGACAGATCTGATGTATTTTCTTATGGCATCATGCTTTTGGAACTAATTACTGGAAGGCGCCCTGTTGATTCACGTCATTCTTACATGGATGACAGTTTAGTAGACTGGGTTAGTTTTATTCGTTTAATTGACACTTATCCCCTCTTTATGGAAACCATGACCTGTGCACATGTAAAAACATGTGCCTGTAATAGCTACCCTCTATGTTGTAACTAGTCCTCTTTATGGTGTGTTTTAAACATAGATATGTCCATTATCATATTATAAGTTATGCACAGTGATCACCTACTTTGAGTCTTTGACTTTAAGTAGCAACTAAAATCTCAGTAAAGCAGTAATTTAGCGGTAAAAACATAATATCAAAGCTGAGGTAAGAAGAACTTAAATATTAGTTCATAATCTGAATCCGACATCCGACATCCTAACGCGGTTATGATAGCTTAAATCTTTAAACATTGCTATAAAACATACTTATGCCCAATGGAATCCATGATGTTCAGCTTTTATTTTTAATTTTATTTAATGTTAGTTTATATCTTATGCAACATATACATGATAGCTAGCTTGTTAGTTTCGGTACATAAAGTTATTATTGTTGAATGCAAGTTTCTTTTGGGTGTACAGGTGAAGGGTTCAATCATATAATAATTTACATATATTCATAACTGCAGGCGAGACCACTGCTTACACATGCACTTGATAGTGGCGTCTATGATTCTCTAGTTGATGAACGGCTTGGAAAGAACTACAATGCTAATGAGATGGCACGTATGGTAACATGTGCTGCAGCTTGTGTTCGCCACTCTGCACGGCGTCGGCCTAAAATGAGCCAGGTATCATTGTTGAACCAATTTTCCATATTCAGATAATTCTTATGATACATACATACATACGTCCATATATTCAGATAGTTTTTATTATACACACACGTCCTTGCATTACACAAAGCAACTTTTATCTATGAATTAGATTTTTAATGACACATGCACACATGTGCTTGCATTACACAAAGTAACTTTTATCTATGAAGCCTCTCTTTCCCTTTTTTATGACTAACATCTCATTTAGCCACTTTTTCTTGAATTTTATAATCAAAGCTTATAACACATTCACATGAGTAATATGTATTTGTGACTATGATGTACATAATGTTGGGCTCACCTCCGTTATACCCGAACTAGATGTTCCCATATGCTGCATCCATCATATGCATCCATCGTTTTTGATCGGATTCATTCACGCATCGTTGGATTTGTATTTTGCGGGTGCGTGGTCCATGACCAAGTTTTGAAAACATCTTTTTAGTGCATTATTTGCAAAAATATTATGATATTATCAGCATGAAATGAGGTTGTTTAAAGCACACATGGAATGCATGTATAGGGTTTCACATATTAAGAGTAGTTTGTTAACTTAATAAAGCAATAATATAGAATGAACCAGACACATATGGTTTTGTACACTAATAAATACATAATATCATGATAATGATGCAGCATATGGCTTGATTTATATCTTAAATTTAAACAGATTGTTCGAGCATTAGAAGGAGACGTGTCACTCGATGACTTAAACGAGGGAGTCCGACCTGGACATAGCAGAGTGTACGGTTCATACGACAGCACCACCGATTACGACTCAGGTCAATACAACAAAGACATGCAAAAGTTCAAGAAAATGGCGTTGGCAAGCAATACTTATGCAAGCAGCGCATACAGTGCACCAACCAGCGAATACGGCCTAAACCTCTCTGCCTCAAGCAGCGAGGGCCAACACACTCAAGAGGTCGAGTTGCTCGATTCAAAGAGAGACAGCCATGGAAAAATTTAGTAAAAAAGGATCAATTTGTAATTATTTGGTTGTAAAATTGTTTTTTTTCCCCATTGTTTTTATTTTTCCTTCTTCGTAGGGTGTGATTGTATGTATATGATTTACACGAAGATAATCTAATGATATTTAATTCATTTTTTCTTGATATGGAGAATGTAGTCAAGGTAGACAGCTGCAAATTTTCTTTTGAAAGATCAAACGATACCAAATTCAATGTTTGTTGTACAGCAAGAAATGAGTG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK67150.1	7.1e-197	uncharacterized protein A4U43_C06F16490
Swissprot	Q9LV48.1	3.2e-170	Proline-rich extensin-like receptor kinase 1
trEMBL	A0A5P1ESW8	5.1e-197	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G24550.1	74.05	3e-179	625	ATPERK1;PERK1	proline extensin-like receptor kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G06325	AT3G24550.1	393	101	1	234	625	254	646	74.05	3e-179	625
AfisC6G06325	AT2G18470.1	510	192	6	79	585	115	608	58.63	3e-165	578
AfisC6G06325	AT4G34440.1	620	207	10	38	607	78	657	52.10	2e-160	563

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	265	533	156.3	7.8e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0007166	P	cell surface receptor signaling pathway
GO:0019722	P	calcium-mediated signaling
GO:0009506	C	plasmodesma
GO:0009611	P	response to wounding
GO:0009620	P	response to fungus
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009845	P	seed germination
GO:0010068	P	protoderm histogenesis
GO:0019901	F	protein kinase binding
GO:0042335	P	cuticle development
GO:0046777	P	protein autophosphorylation
GO:0048364	P	root development
GO:0048367	P	shoot system development
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network