result

Gene information

Detail information of AfisC6G06390

Location

Gene	Chr	Start	End	Strand
AfisC6G06390	chr6	1120771287	1120774394	-

Sequences

CDS

Protein

Gene

>AfisC6G06390
ATGTCAGTGCCGGTCACGGACGTGTGGGAAAGCACCGTAAGCATGCCGGAGGTCGCGGAAACGCCGGAGGCTTGCACCACCACCGTATCCTCTTTGACAAGTACCATCCTGGTTACTTCGAGAATCCTCCTTTTCTGATGAGCTAAGTATACGAAATTAGTTAGTTGTAGTATAATCATTATGTTCTGCTTGTTTGCTTATATGTTCCATCTTTTATTTTCCTTTCAATGTTGTTTTGTCTTTGTCTTCTTTGCTACCCGCTTTGTCAGTGTTACTTGATGATTGTTGTATCCTTGTTTTGCCTTTGTACCGCCAGTTTCAATAGAGGTTGCAGTGTGTGTGCTTGAGTTTTGGGTCTTATTTTCCTCTGCTGACTTACTTTAATAGGAAGTGGTCGGAATGTTTAAGTGTGTGGCATTACTATGGCTGGTTTGACTATGAGAGGAGGGTTGTGATGTGGGTTCGGTTGATTTTTGTTTCCAACCCTGATCAGTGCCTTGCCTATTTGGTTTATTCTTGATCCATTTTGTACTTTAGTGACCAAATTATCGGTTATGCATATGTGTATAGGGTTTAAATTCATAATCAACATGAATCTCACAGTTATCACCTCTAGTATTCTTGACAATGATAGTTTCTGGATACTTGGTGTCTTCATTTATAAGAATTTTATCATAATTGGTTCTCTTTCTTAATGTAGTGACAACATCAGGCCTGGTGGGCACTCCAATTACGCTAGCAGTCCTACTCAAACATCTATATCCCAATGTTCTAATTTTAAATTGCAAAGTTTTATCCAAATATGCATGCCTTTACTTTTTACATGTGAAATCGATGTAAGCAAGGCCGCTTTTGTTCATTACGCATATAATTATCCATTTGTCTAGGCAAAATGAGGAAAGTAAGCTAACAAGTTTAGCTAAAACAGAGAAGAAGTTGGTAAGTTGGGTAACCAATATATTTTACATTTACTTTACTCAACCTTCCTTCTAATCCATTCATTCGGCTGACCGGTAATATTATATTGGACGATTACAACGTACGGAAAGCATGATTCCATATGGCATACTCCAAATTCTCTATTTTTCATCATTTTTATTTGTGGCGATTTAGTTTGTTTATAGATAATTCAATCACACGACATTTTCCCGTCAATTGAATGAAAATACTAAGTACTGATATTTTGAATATTCTATGACTGAAAAAACTTGATTATTTTGATTATGAAGATATTATATATTTTGAAAAGACAACTCCTTCCCACAGGAAGAGCACTTGCAAATTAAAAGCAGAAAGAAGCAAGAAGCAGATAAAATAATAACATGGGATGACTACAAGGGTTTGGAATTCACAAAATTTGTAAGCTCGTACAAGTATATTAAAAAATATTTCGACATTCTGACATAAAGAAAATCCATTTATATAATACCACTTCTTAATATGATATGAACGTGAAGGTCATTAATGAAACGCTTCGACTGTCCAATACTGCTGTCGCTGTTCCGAAGGTGGCAATTACGAATGTCGAATTTAAAGGTACGGTCAAGATATTAAAGGATATTTATTTATTTAGCCATATTAAAAAAATTGATCTTATTTATTTCAAACTGTTTTAGGTTATCTAATTCCAAGAGATTGTGATGTAATGCTACACCATAAATCTGTGCATTTAGATCCATCACTATATATTAATCCTGATCATTTCAATCCATGGAGATGGCAAGTGAGTTCTCACTTCGATTGTGTTATTAGCTTAAACATTTCAATTGTATTTTTAACATCAAAGAATCAAACTGATCATACTGAGTAATAATTGAGCCTTAAAAGAAGGGGGAAAAAAATATAGTTATCTTACTTTTACTTGACTTTGCTGTCTTTGGCAGTCAATATCCAACATTCATATGTCAAACACCTTCATGCCATTTGGCGGCGGGGTTCGACAATGTCCTGGTTCAGAGTTAGCAAAATTAGAAATGATGGTATTTCTTCACCATTTTTTACAATTGGCATAGGATAACCGTTAATAGGACAAAAAAACTCATATTCAACTACAATATTATGTTGTACATAATAAACTTATTTTGAATATTCAAAAGTTGAAGAACATGCATGGAGTTCTAACTTTAAACTTGAATACAATTGCTTTAGGAATAGAGTTACTTAAAGTACCACATTTCATATTCACCTGAGCTGTCACATTTTAACCTGTAAAAATATAAACAGTCAGCTACAAAAATCATCAAAAGAATGGCTGCTAAGGTAACATATCTAGTTGCATGTAAATTTTAGTTTATTATCATAAAGATTTGAAAAATGTGCATCCATATAGACAAGATTTATACCAAATTTTAAACTTTTTATCATTTGTATATTTACATCTTGGACCACTTTAGATAAGTTGAACCACCATAAATAGTAAAATTGTGTATACTACAGGTTGACATGAGTAGTGGCTGTAGTTGATGCGCTGGAACTTCGGCTTGAGTAAGTAGTAGTTGACTCGAATATTGATTAACCCATTTAAGTACTAGTTGCGTTGATGGCCTTTTAAAATAGTTTGTTTGGATTGATTAACCCATTTAAGTACTAGTTACGTTGTAGGCTGTAGTTGATTAGCTCATCCAGTAAGTACTAGTTGAGCAAATTGTTTGTAGCTTGAAGCATCAACGCATCAAGAGATTGATCAACAACTGTCCTTGTTTAATCTACCAGCTAAAATTCTTTGCAAAGTATTCAATATTCAGCTTCTGGTAACTCAAAATTTATGATTTGTGTTATTTTCTAGAATTATTTGATGCTTGTAGGCAATTTTACTAATTGATGGTTTGTTTTGGTAATTTAGGCAGAACCAGAAACAGATGAGGTCTTTGCACAAATCACTTTGCAATCTGTACCAGATGTGAGCTCTATTTCTTTATTAATTGACCTCTAGTTTTTAATTAAAATTAGTTTTAAAATGAAGTTTTCTTTTAGTTGCTGCTACTTAATGTTTGTGAGTTGTGTTGATATGATACTTAATTTAATTTTGATCAGAAAGGAGAAATAACTAAACCAGATCCTCCATCTTCTGAACCTAAAAGGTGTAACGTGGAGATGTCAGGGGAATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_026664889.1	1.1e-22	cytochrome P450 90B2-like
Swissprot	Q5CCK3.1	2.5e-19	Steroid 22-alpha-hydroxylase
trEMBL	A0A8B9AGU1	1.4e-22	cytochrome P450 90B2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G36380.1	49.52	3e-22	101	ROT3	Cytochrome P450 superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G06390	AT4G36380.1	105	52	1	27	130	369	473	49.52	3e-22	101
AfisC6G06390	AT3G44970.1	100	53	0	31	130	337	436	47.00	1e-21	99.0
AfisC6G06390	AT1G78490.1	100	53	0	31	130	337	436	47.00	2e-21	98.6

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	27	131	100.8	6.6e-29

Gene Ontology

Accession	Ontology	Name
GO:0009687	P	abscisic acid metabolic process
GO:0009826	P	unidimensional cell growth
GO:0009911	P	positive regulation of flower development
GO:0010114	P	response to red light
GO:0010224	P	response to UV-B
GO:0010268	P	brassinosteroid homeostasis
GO:0010295	F	(+)-abscisic acid 8'-hydroxylase activity
GO:0010584	P	pollen exine formation
GO:0016125	P	sterol metabolic process
GO:0016132	P	brassinosteroid biosynthetic process
GO:0020037	F	heme binding
GO:0031966	C	mitochondrial membrane
GO:0048366	P	leaf development
GO:0048657	P	anther wall tapetum cell differentiation
GO:0048838	P	release of seed from dormancy
GO:1902652	P	secondary alcohol metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network