Detail information of AfisC6G06397


Location
GeneChrStartEndStrand
AfisC6G06397chr611213254801121341106+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRWV79032.13.6e-25hypothetical protein GW17_00059901
SwissprotO22210.13.3e-20Transcription factor MYBC1
trEMBLA0A8S0RXQ35.2e-26Late blight resistance homolog R1B-17

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G40970.140.621e-21 102MYBC1Homeodomain-like superfamily protein

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Ortholog group
SpeciesGenes
Allium cepag458169.t1
Allium fistulosumAfisC6G06397
Allium sativumAsa8G00331.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain25430426.74e-06

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005739Cmitochondrion
GO:0004821Fhistidine-tRNA ligase activity
GO:0005634Cnucleus
GO:0006427Phistidyl-tRNA aminoacylation
GO:0009507Cchloroplast
GO:0009658Pchloroplast organization
GO:0009788Pnegative regulation of abscisic acid-activated signaling pathway
GO:0009910Pnegative regulation of flower development
GO:0010380Pregulation of chlorophyll biosynthetic process
GO:0010638Ppositive regulation of organelle organization
GO:0016036Pcellular response to phosphate starvation
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0032107Pregulation of response to nutrient levels
GO:0042753Ppositive regulation of circadian rhythm
GO:0055062Pphosphate ion homeostasis
GO:0080022Pprimary root development
GO:1900056Pnegative regulation of leaf senescence
GO:1901699Pcellular response to nitrogen compound

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14491ARR-B; two-component response regulator ARR-B familyEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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