Detail information of AfisC6G06501


Location
GeneChrStartEndStrand
AfisC6G06501chr611347295891134730772-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020275838.16.0e-59trihelix transcription factor ASIL1
SwissprotQ9LJG8.12.2e-10Trihelix DNA-binding protein ASIL2
trEMBLA0A5P1EEG54.3e-59Myb_DNA-bind_4 domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G54390.145.425e-50 194sequence-specific DNA binding transcription factors

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag307896.t1
Allium fistulosumAfisC6G06501
Allium sativumAsa4G05813.1
Arabidopsis thalianaAT3G54390.1
Oryza sativaLOC_Os09g38570.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13837.3Myb_DNA-bind_4Domain1610663.61.5e-17

Gene Ontology
AccessionOntologyName
GO:0005730Cnucleolus
GO:0006351Ptranscription, DNA-templated
GO:0009733Presponse to auxin
GO:0009793Pembryo development ending in seed dormancy
GO:0010029Pregulation of seed germination
GO:0010431Pseed maturation
GO:0044212Ftranscription regulatory region DNA binding
GO:0043565Fsequence-specific DNA binding
GO:0048831Pregulation of shoot system development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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