Gene information

Detail information of AfisC6G06545

Location

Gene	Chr	Start	End	Strand
AfisC6G06545	chr6	1143354231	1143354450	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_025824833.1	7.9e-15	transcription factor MYB8-like isoform X2
Swissprot	Q9SCP1.1	4.1e-08	Myb-related protein 27
trEMBL	K3Y9D0	5.7e-15	Transcription factor MYB21

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G13480.1	58.93	8e-13	68.6	AtMYB79;MYB79	myb domain protein 79

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G06545	AT4G13480.1	56	19	2	2	53	81	136	58.93	8e-13	68.6
AfisC6G06545	AT3G30210.1	67	27	2	2	66	102	168	56.72	6e-12	65.5
AfisC6G06545	AT3G24310.1	28	1	0	2	29	93	120	96.43	2e-11	63.9

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	2	26	32.8	5.1e-08

Gene Ontology

Accession	Ontology	Name
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001135	F	transcription factor activity, RNA polymerase II transcription factor recruiting
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0006357	P	regulation of transcription from RNA polymerase II promoter
GO:0009414	P	response to water deprivation
GO:0009611	P	response to wounding
GO:0009625	P	response to insect
GO:0009651	P	response to salt stress
GO:0009682	P	induced systemic resistance
GO:0009686	P	gibberellin biosynthetic process
GO:0009723	P	response to ethylene
GO:0009737	P	response to abscisic acid
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009800	P	cinnamic acid biosynthetic process
GO:0009892	P	negative regulation of metabolic process
GO:0010200	P	response to chitin
GO:0010438	P	cellular response to sulfur starvation
GO:0010439	P	regulation of glucosinolate biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0016036	P	cellular response to phosphate starvation
GO:0046686	P	response to cadmium ion
GO:0030154	P	cell differentiation
GO:0043565	F	sequence-specific DNA binding
GO:1900384	P	regulation of flavonol biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network