result

Gene information

Detail information of AfisC6G06884

Location

Gene	Chr	Start	End	Strand
AfisC6G06884	chr6	1192377667	1192383395	+

Sequences

CDS

>AfisC6G06884
ATGGTGAGAGAAGAAGCAGCGGTGGAGAAGGGAATGCGACTGGGGAAGTACGACGTCGGAAGGACTCTCGGCGAGGGCAACTTCGGCAAGGTGAAGTTTGCTCGCCACGTTGAAAGCGGGCGCCCGTACGCCGTTAAGATTCTCGATCGGAAGAGGATCCAGTCGCTTAAGATCAACGACCAGATTAAGAGAGAGATCAATACACTGAAGTTGCTTAAGCATCCTAATGTTGTTCGCTTACATGAGGTCTCAGCAAGCAAAACAAAGATTTATATGGTCCTTGAATACGTAGATGGAGGCGAATTATTTGACAAAATTGAATCTAAAGGAAGACTTTCAGAATGCGAAGGTCGGAGGCTTTTCCAGCAGTTAATTGATGCTATAAGCTATTGCCACGATAGAGGTGTCTACCACCGAGACTTGAAACCCGAAAATGTTCTTATTGATGCAAATGGGAATATTAAGATATCAGATTTTGGTCTCAGCGCATTGCCTCAGCACCTTGGTACAGATGGATTACTGCATACAACTTGTGGCAGCCCGAATTACATTGCTCCTGAGGTGCTTACAAATAGAGGATATGATGGTGCTATGTCCGATATATGGTCATGTGGCGTAATTCTCTATGTCATACTTACAGGATCTCTTCCATTCGATGATAGAAACCTTGCTGTTCTTTATCAAAAGATTTTTAAGGGAGACTTCCAGATTCCTAAATGGCTATCCCGTGAAGCACAGACCCTAATTCGAAGGATTCTTGACCCTAACCCTAAAACTCGAATAAATGTTGAAAGGATTAAAGCGGATAATTGGTTTAAACAAGACTATATTCCGGTCACTCCATATGACGACGACGAAGAAGAAGAAGTTGATGCAACTAATAATGATGCAGTAATAAAAAAGCCCATCGAGGCAAACGGAAGTCAAAATGAAAACCCTAGCTCGATCAATGCTTTTCAACTGATTGGAATGTCCTCATTTCTTGACCTCTCAGGCTTTTTTGAAGCAGAGACTGTTTCAGAAAGGAAGATAAGATTCACCTTAAATTATTCGCCAAGTGATCTATTTGAGAAAATTGAGAGAATTGTTGGAGAAATGGGATGTCGAATAAAAAAAGGACATGGCAAGCTGAAAGTTGTGCAACAGAATGACAGTTCATCAAGCCCAAAAATCTCAGGACCCCTTTCAATTGCTGCAGAGGTATTTGAACTGGGTCCATCCCTATATGTTGTTGAACTAAGGAAATCTCACGGAGATTCCTCGCTGTATAGACAGTTATGTTCAAAGTTATCAGTTGATTTGGGTGTTTGCCAAAGCCATCAGCCTACGAAACCTAAAACAAAGGTGCCTGAACATAATCGTTTTGATGGAAGTTTGCCAGTAGCTGCGTTGTGA

Protein

Gene

>AfisC6G06884
ACAAGCAAAATAAGAAGGTTTTACCAAAATAATAAAATCCGCCAAGGAAGAAGGAGATTACAAGTATACCCTTAACTTCTGCTCACCTCCTCGTCCGCAAATGGTGAGAGAAGAAGCAGCGGTGGAGAAGGGAATGCGACTGGGGAAGTACGACGTCGGAAGGACTCTCGGCGAGGGCAACTTCGGCAAGGTGAAGTTTGCTCGCCACGTTGAAAGCGGGCGCCCGTACGCCGTTAAGATTCTCGATCGGAAGAGGATCCAGTCGCTTAAGATCAACGACCAGGTACTTAAAACGCAGTTAGGGGTAATCTGGTAATTTGTGGACGATGAATAGGGATTAAGCAGTGAAATTTGATTTCAACAGATTAAGAGAGAGATCAATACACTGAAGTTGCTTAAGCATCCTAATGTTGTTCGCTTACATGAGGTCGGTCTTCCATTTTCTTTATTTTCCACATGTTTTTTGTGACTTGTTTTTTATTGCTACCCTGCTATTAAGAGCAGCCTAAACATAATTTGCTAAGCATTTCTCTACTAATATTTTTTTAGATACTTTTTGACCAATTCCTTTTTGTTTTTTATGAAAATATTGGATACCATTATTCTTCTGCTTGTTTTAACAAGGAGCAATATTCTTTCTATGTTAAATTGGATTTTAAAATAATTTTGTTTTATTGAACTTTGTTTAAACTAGACTAGTACGGAATTCATCCTGCTTTTTACTTCAGTTCACATTTTTTTTACTAAAAGAAAGTAAAGCATCGTGATGCTTCACATTACCCGTCCAATAGCTTCCATGCAGATGAAGTGCAACAAGATATTGCCACCCCCTTAATCACATGGGTTTTAAGCGTACTATTCAATTCCTCAATAGCATGTATAAATTATTAATATTTATATTATATTACAATTAAATGAAAATCAGAAATATTACATTCTTGGCTCCACAAGCTTCAACCATATTGTAGATTGTCATACTCGTTTAATGCTTATTTTCAAGTTAAAGGAAGCTTGATTCTTCTTGAGAAGAGAACAGCACAAGTTTTGTCATAGTTCATTTTTGATTTCTCTTTTGATTTCTTCGAGATCCCATGATATAGTTATCTAGATCCCTTCGAAACACATATCGCGACAATTTTTTTTGACTTTCTTTGAAGTTTTGAAACGAAATGTATGATTTCAACGCCAATGCAAGCTTACATTTGTTTGGATGCAAGTGTATGTAAAAACTACACATCGATCAAAATGGATCGTTAAAATACAAATTTGAGCTTTTAAAAATATTTGTTTTCTGTTAAATGCAACCAAAAATACCATGATTTGTCATTTCTCAAGCTTCTAGTAGCTTAGAAAACTATAATAGCTTGCTACGGTGAGTCTAGGGGGAAAAAAAAGAGGGGTTTGGTATATAACCATAACCAGTTTATCATCCAGTAACTAGATATTTGAATTTCTAACTAATTAGTTATTCAGACTCGATGGTAACTATCATACCTGATCACAAATGAATTGCAAGGTTAAGCTTATAGTAGCGTTTGCCAGAACTATTACTGTTGCACTTGGTAACAAACATAAATATCACATCTGGTTTAACTACTTGTCATATAGGCAAGCAAAAATGCCACCTTTTGTTTCTGAAAAATCTCCTATATTATGCTTGCTGTTCAATTTTTGGTGCACTATGCTAAACTGATTAATAATAATTTTCAGAAGTGGTATTTCTTTCCATCTTTTTAATATATATGGAATATTTAAAAATAAATTATGAAATAGCACATTTGCATCTTCTTCTGTAGCAAGCTATAGCTATTGTTACAGTAACATAAACTTAATGGAATTTATGTGGTTGCTATGTCCATTAAACATGAAAGTATTGTGACATCATTTGTGTAACAAAAATAGCCTTTCTCATTTATATTCATAGAAACATACGAAAAGTGGGTAGGAGTGCATGACCATAAAATAATTTATGCTAAAACTAAACTACAAACCAAAACAATACACGTAACTTCTAATAGTGAGAGTTTAACTGCAGAACTATGCCATGTTTCACATGTTCGATTTTCCTACGTATATGTGAAACTTTCAACCCTCTCTTGCTTACGTTGTATGAACTATAAATATACAAAAAATATAATTGGAAGTCATGCACAGCATGAGTTGTATTGCCTTCTTATGTGCATATGTGTATATATAGATTTGTGGTTGTCGGTATGAAAAAGGGCCAAGGCATGTGATTCAACCAGATTTGCCTTCAATTGCATGTCAATATCCTGAAACTACCAAACCAATCTAACGTCATTGGACATGGATGTCTAACCAATCCAAATCGCAAGTGGGCTCATATACTAACACATACATTTTATTTTATTTATGATAATTCCAGATGTGTGAGTTCAGTTCTTTGGTTTCATAGAATATGATATATGTCGTAATATTATTCCATATATATTATTGTAATATCAATTGAACTACCATATTTAACAGTCGTTGATGGGCAAAACTTTTATGATTTATGACAAGTTTATAAACCGAAATAAATAGTGTAAATTAAGCAAATATAAGTTAATTCCATTTGTATGTGTTTCTCTGAGAAATCTGAGAAGAAAAACAGTAGAATCTTTACCAGTTAATGGTGGATGTTGCTTTATATTCTTTTTTAAATAAAAAAAAAAGATTTATGGGAAAATAAAATCCCTCATCATTTTGAATAACCGAATACCATTCAGGCGTAAACTTGGTGCTGTCTTAATTGAAATTTGAACTTTATAACTACACAGAAATTGCTTGATCTTCATCATAAGCAACATTGAATGGGAGTTATCCATGAAACCAGAAAACTGGCCGGACTGTCCTAAGCTATTAATATCCTTGCTTGTAAGTTAAATTATGAGAATTTCAAACTTAAGTTACACCTTTAATTTCGGCATCCATTTTCTAAATAGATACACTAGTAAATGATGTACTGCTACTCTTATTGTATACTGTATACCAAATGAAAATAAAGAAGGTTTAGAAGAACAATATTAGTTAGTTACAGATATTTACATTACAAATGTGGATAACATACAAATAATAACAATTAAATTTAACCTAATCAAGCAAAATAGAGGATAGAGTACTTCGATTTCAGCTTCAGCGACGTTTTTTTTCATTTTTTTTATAGTTTTTTTCTAAATTTTTCTGATTTTTCTGTCATATACTTTGTAAACTTGTTCCAAAGTTAAATTTAGGTTTTCTTTTCTTTTCTTTTTCTAAGCTATTCGAAACTAGAGTTTTGGTCTGGATTATAGAGTTTATGGGATGTTTTAGTAAACTACTTCTATTTTTTTTGTATTGTACTGCGGTGTTTTCTTGATACTTTTCACGGAGTTTTAGGTTATGATACTATACACCGTGATTTACTTTGCAGGTCTCAGCAAGCAAAACAAAGATTTATATGGTCCTTGAATACGTAGATGGAGGCGAATTATTTGACAAAATTGTAAGTTACTAAGTTCATATATTTACAAATTAAATTAAGCATCAAACTTAGAATTTGCAAGAAATTACACCAATTTCAACAGGAATCTAAAGGAAGACTTTCAGAATGCGAAGGTCGGAGGCTTTTCCAGCAGTTAATTGATGCTATAAGCTATTGCCACGATAGAGGTGTCTACCACCGAGACTTGAAAGTATAATAACACATTTGATAATAAAATAACTTTATCTACTTGCAAATATACCATTGGTTACATTTTCCATAATCATATTTCTATTGCAGCCCGAAAATGTTCTTATTGATGCAAATGGGAATATTAAGATATCAGATTTTGGTCTCAGCGCATTGCCTCAGCACCTTGGTGTATGCTACTAACATTATATTTATTCACACACGCGCGCATGCGTGTATCCATTAAATTTTCATAAACTGTTTTATGTGCATCTTATATCTCTGTTATATATTTCAGACAGATGGATTACTGCATACAACTTGTGGCAGCCCGAATTACATTGCTCCTGAGGTAAAAGGTTAATTCAATTTTCAATGTTATCCAATTTCATTTTCTCTTTTAATTTACTATAAATGTAAAAAAAAATTAAGTGTGTTTTGTATTTCATTTGTAGGTGCTTACAAATAGAGGATATGATGGTGCTATGTCCGATATATGGTCATGTGGCGTAATTCTCTATGTCATACTTACAGGATCTCTTCCATTCGATGATAGAAACCTTGCTGTTCTTTATCAAAAGGTACAATTTGTAAAGTAATATGAGCATTTCGTTATTACTTGCATACTTGATCAACTACTTTAACATTGATTTTGGAATTTGGTAAAGATTTTTAAGGGAGACTTCCAGATTCCTAAATGGCTATCCCGTGAAGCACAGACCCTAATTCGAAGGATTCTTGACCCTAACCCTAAAACTCGAATAAATGTTGAAAGGATTAAAGCGGATAATTGGTTTAAACAAGACTATATTCCGGTCACTCCATATGACGACGACGAAGAAGAAGAAGTTGATGCAACTAATAATGATGCAGTAATAAAAAAGGTATAATGTTATTCTGTGCGTGTTCTGTAAATTAGTTTGATTAGATAAACTTGCATATAATTTGCTGATGCTTATTTATATTTTCAAAGCCCATCGAGGCAAACGGAAGTCAAAATGAAAACCCTAGCTCGATCAATGCTTTTCAACTGATTGGAATGTCCTCATTTCTTGACCTCTCAGGCTTTTTTGAAGCAGAGGTAAATTGTTATATAACTACTGTAAAGAAATTTGAAAATAAGATAAAGTACTAACCATTTTTTTATTGAACATGCAGACTGTTTCAGAAAGGAAGATAAGATTCACCTTAAATTATTCGCCAAGTGATCTATTTGAGAAAATTGAGAGAATTGTTGGAGAAATGGGATGTCGAATAAAAAAAGGACATGGCAAGGTATACTTCAATTCATATAAACAAAAAATGAACAAGAGTTCTCTGTGTCATTCAGCAATAGATAGCTAATTATCAACTTTCAATACTTTGCAGCTGAAAGTTGTGCAACAGAATGACAGTTCATCAAGCCCAAAAATCTCAGGACCCCTTTCAATTGCTGCAGAGGTAACTATTGTTTATTATTGTCTATGGATCTCCATTACTGATAGTTTATAGTATGTCCATATAATTATGTACTAAATAATATATATGATTGGTTAGGTATTTGAACTGGGTCCATCCCTATATGTTGTTGAACTAAGGAAATCTCACGGAGATTCCTCGCTGTATAGACAGGTATCCAAACTGCTTAATTTTGTAAAACCTCAGTGACAGTATTTGTACAAATGAATAGATGAATAAAACCATTGTTGGCTGGCCTAACTTTTTTTTTGTCCATCCATTATTGCAGTTATGTTCAAAGTTATCAGTTGATTTGGGTGTTTGCCAAAGCCATCAGCCTACGAAACCTAAAACAAAGGTGCCTGAACATAATCGTTTTGATGGAAGTTTGCCAGTAGCTGCGTTGTGATAGCGTGTTATGTACATCCTTCGTCATTCATTTATTACTACAAAACTTGAATATTTTTATTCAAGGAATCTAATTATACACGTTTTTTCCCTAGGTTCACAATTTGGGATAAAATTATCCTGGAAAAAAACATGGGAACAAGTTTATTCTAATCAGAGATGAAACATTGATCTCTTTATTTTATATGTGAATATATAGTACTGTATGTTTATAGTTTTCTCAAAAGTGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273162.1	1.9e-202	CBL-interacting protein kinase 1-like
Swissprot	Q9LGV5.1	2.1e-174	OsCIPK01
trEMBL	A0A6I9S7H5	7.7e-190	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G17510.1	65.77	3e-160	561	CIPK1;SnRK3.16	CBL-interacting protein kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G06884	AT3G17510.1	444	145	3	1	441	1	440	65.77	3e-160	561
AfisC6G06884	AT1G48260.1	428	149	4	8	435	2	422	63.55	8e-155	543
AfisC6G06884	AT1G30270.1	425	195	4	14	434	28	447	52.00	1e-127	453

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	17	272	244.3	1.2e-72
PF03822.11	NAF	Domain	313	372	58.3	5.6e-16

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0007584	P	response to nutrient
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0009651	P	response to salt stress
GO:0009705	C	plant-type vacuole membrane
GO:0009749	P	response to glucose
GO:0010107	P	potassium ion import
GO:0010118	P	stomatal movement
GO:0010167	P	response to nitrate
GO:0046777	P	protein autophosphorylation
GO:0048364	P	root development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K07198	PRKAA, AMPK; 5'-AMP-activated protein kinase, catalytic alpha subunit	EC:2.7.11.11	Apelin signaling pathway	ko04371
			FoxO signaling pathway	ko04068
			PI3K-Akt signaling pathway	ko04151
			AMPK signaling pathway	ko04152
			mTOR signaling pathway	ko04150
			Autophagy - animal	ko04140
			Tight junction	ko04530
			Insulin signaling pathway	ko04910
			Glucagon signaling pathway	ko04922
			Adipocytokine signaling pathway	ko04920
			Oxytocin signaling pathway	ko04921
			Axon regeneration	ko04361
			Longevity regulating pathway	ko04211
			Longevity regulating pathway - multiple species	ko04213
			Circadian rhythm	ko04710
			Thermogenesis	ko04714
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Bacterial secretion system	ko03070
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Biofilm formation - Pseudomonas aeruginosa	ko02025

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network