result

Gene information

Detail information of AfisC7G00072

Location

Gene	Chr	Start	End	Strand
AfisC7G00072	chr7	12428100	12432058	-

Sequences

CDS

>AfisC7G00072
ATGGGCTGCTTTACATCTTTGAGAGGGAAGAAGAAGAAAGACGACAAACAAACAAAGACAAACAGCATTTCAAGAACCGAATTCACAAGAACGATGCTTCCAGAACCTGTAACACAAGCACCATCACTTCAGTCTGCTCCTCCAAGCTTCAGAAACCGAGCAAAACAGATACCATTAATCAAGCGACCTAGTATGAATTCTCGCACTCGTGCATTATCTGCTCCATCGAGTTTAGTTGTTGACGATCATTATGCTCTTTCATCATCAGAAGTTGAAGACCAAGAAGAATATAAGGGTCAAGCTGGGTCGATAAATAACAACAGATTTTCAAATCCTCTGCCTCTTCCACTTCCATCTCCTAAAAGCATATATTATTCTAGAAGCTTCAAATCAGGGAATGTGAGCAACAGGATGCAAGTTCCAGGTCCTTTGCCTTTGCCTCCACAAGACGGACTTCGTAGTTTTTTGTATGAGGAAATTTCATCTGCTTGTCAGAATTTTTCAGTTGACAGGTGTATGTCTGGAGGTATATCCTCGACTGTATATAAAGCTACATTTGGTGATGATAATGGAAGTTCGAAGAAACTAGAAGCTACGGTTACTTGTTTGTTACCTTCATCAAAGAGCTTGAAGGAGTTTATTAATGAGGTGAATACTATAGCATCTCTACAACATCCTCAGTTATGTAAATTGCTTGGGTTTCATGCGCATGAGGAGTCTGATCAGAGAATTCTAGTTTATGAGAGATTATATCATGGAAGCTTAGATCGACTGTTGTATGGTCGATCAGATGGGCCTTCTATAGACTGGAATGCTCGTATCAAAATCGCATTGTGTGCTGCACATGGGCTTGCCTTTTTGCATGAAGAGGGGCCATTTCAGGCCATGTACAGCGAATTCTCAACTGCTAACATACAAGTCGACAAAGATTTTAGTGCAAAACTATCTGGATATGGATGTGTGAGCTACAACCCAGATGCAGACATCGTTTCATCGGCTACTGCAAACCTATCTATTGAAACTCTTGAGAAAGGATTACTTACACCTAAAAGCAACGTATGGACTTTTGGCATCGTTTTACTCGAACTGCTCACTGGTCGAAAGCATTTGGACTCACGCCATCCAAAAGAAGAAAGAAACATAATAAAATGGAGCAAGCCTTTCTTAACCGATGACTGCCGCCTATCCTTAATAATGGACCCTAGAATCAAAGGGCGCTACCCTGTAAAAGCAGCCAGAACTATTGCTGACATTGCCTTAAAATGCATCCAAAAGGACCCTTCGGAAAGGCCTACCATGAGAACTATCGTAGAGTCACTGAAGAACGTTAAAGAGATCAAGTTCTCGTGTAGGTATCCTCTTCAAGAGCCTTCAGATGTGAGGAAGCATATGATGAAGTTTTCTAGCTTCAATGGAGTTGCTCAAGAAAATATCTCTAGTTTATCTCCACCTTTATCTTATACGACACAGACTTTAGATTCTGCAAGAAATTGTGCTTCGAATTATAGCATAGAACATATTCATAGGCTTTCCAATGCAAGAAAATCGTATTCTACTGTTGGGAGGCCAAGGGTTGAAGGGTTTTGA

Protein

Gene

>AfisC7G00072
AAATGTGATTCATTGGCAATATCTTTGCTTTGACCAGTGCCCCGTATGTCTCCATCATCCCATCTAACTTTCTTCTCATTCTTTTCCATTTTGTTTTATTCATTTTTTTTAACCCATTTTACATCCTTGGTATTATCTCAAGGTTAGAAGATAGCTCATTCTTTCTCTGCTTATTTTCTTTTTTACTCTTGGATCATTGCCTGTGCTCAGTTCAATCGCGTATTACTGCCAAAGGTAAGTTTTGTGTTCTATTTTGAAATATACTCATTTCTTGCCGAGTTTAACTAGTTTTAGGGGAATAGATAGTTTTTAGGAGAATTAGATCTTGTTGATTTCACTAAAGTCATAATACTTTGGGCGTAATGAAATTGGTTAATTTTTTGGTCCACTTTTCGTCTATTTATATCTCTATTTTGTATTTTTGGTGGTAATTTTGGGACATCATTTGGATTAACAAAATTTAGATAATCGTCCGATTTTGAGTATTTGGTAAAAATGGGTTTCGTTGAATATGATGGTTTGTTGAAAATTTTAAAAAAGATTCAATTTTAGATAGTTGAATATGCTAATGGAGCTGTTAACTTTGGCATTATTATGATTTTGAGATCTTTCTGTTTGCTTGTTAAATTTGGGGTTTTCTCATTTATTTTCATAACCATCTATTACCTTAGCTAGATCTGCATAGATTGTTGTCTATATAACTTGCAACTATTGAATATCTTTATGAAAATAATTTAGCTATATTGAGCAAAATACTGAGCAAAATAAAGAAATCTGTAATTATCTAGCTTTTGTTAATGGTTGGTTGAATATACATAATCTCCATTTCTTTTGCTTATGAAATTTACAGCAGTAACATCACACAAAGAAACGTATGATTTCATCATCATTTAATTTTCGTTCTATGATTATGAATTCAATGGTTTGTTGATATTGATTCAACATTTTTGACCTGCAAGGCTAGCAACAAAACTTTGAACAAACAGCAGGGTTAGTATGATTTTAGTGGCTAAGTCAAAGGTTATAGAATATTAAATCATAGTCCAAACCAATTATGCATGCTCCCTATTGTTCATAGTATATTCATATTTCCTTTTAGAAGGTTTTAGCCAGCACTGTTAGCATTCACTTCATTTAATAGTTTCAATGTTATTTTGTTGTCATCGTTATGGATCTTTGTGATTGCCTAGGGCATATGTAGCATGATTTGCATGAGTAACTGACCTTTAACATTTCCATCTTGTGATCATAATGTTTCATTCCCCTTACAAATGCTCTTCTCATTTTTATCTCTTGCAGTATCAAAGAAAAAAGAAGCAACATGGGCTGCTTTACATCTTTGAGAGGGAAGAAGAAGAAAGACGACAAACAAACAAAGACAAACAGCATTTCAAGAACCGAATTCACAAGAACGATGCTTCCAGAACCTGTAACACAAGCACCATCACTTCAGTCTGCTCCTCCAAGCTTCAGAAACCGAGCAAAACAGATACCATTAATCAAGCGACCTAGTATGAATTCTCGCACTCGTGCATTATCTGCTCCATCGAGTTTAGTTGTTGACGATCATTATGCTCTTTCATCATCAGAAGTTGAAGACCAAGAAGAATATAAGGGTCAAGCTGGGTCGATAAATAACAACAGATTTTCAAATCCTCTGCCTCTTCCACTTCCATCTCCTAAAAGCATATATTATTCTAGAAGCTTCAAATCAGGGAATGTGAGCAACAGGATGCAAGTTCCAGGTCCTTTGCCTTTGCCTCCACAAGACGGACTTCGTAGTTTTTTGTATGAGGAAATTTCATCTGCTTGTCAGAATTTTTCAGTTGACAGGTGTATGTCTGGAGGTATATCCTCGACTGTATATAAAGCTACATTTGGTGATGATAATGGAAGTTCGAAGAAACTAGAAGCTACGGTTACTTGTTTGTTACCTTCATCAAAGGTAAACTCACTTTTAGTGACATATTCATGAATGATATTTTTAGCTCACTCGTATGATTTTGCATGTAATCTTACACACATTTTGTGTCTACATTCTTTTCATATTTGTAAGAAAATTGCTTGTGAAAAATTCTTGTTATATTTTAATAACAAATCTTGTCCTCTTTTAATTGTAGAGCTTGAAGGAGTTTATTAATGAGGTGAATACTATAGCATCTCTACAACATCCTCAGTTATGTAAATTGCTTGGGTTTCATGCGCATGAGGAGTCTGATCAGAGAATTCTAGTTTATGAGAGATTATATCATGGAAGCTTAGATCGACTGTTGTATGGTCGATCAGATGGGCCTTCTATAGACTGGAATGCTCGTATCAAAATCGCATTGTGTGCTGCACATGGGCTTGCCTTTTTGCATGAAGAGGGGCCATTTCAGGTATATAAGTCTACATATACATATGCATATACATATAAAGGTCGGCAGAGATTCAGCAGCATTTTTTATCAATCTTGTCAATACGTGAGCATGTATTTCTTATTAATCTTGTGATCTCTTTTTGTATAGGCCATGTACAGCGAATTCTCAACTGCTAACATACAAGTCGACAAAGATTTTAGTGCAAAACTATCTGGATATGGATGTGTGAGCTACAACCCAGATGCAGACATCGTTTCATCGGTAAGTTCACTTCAGATCTCTATGACCACCTTTACTTAATTGTCCCACCATCCTTGTTATGATATTCGGTGCCTTAAACACATAAATTTAGGAAATACCATTGTTTCCTACTATTTATTATGAAGTTTACTTCTTCTATCGAAAGTTTAATTATGCAATCATGGTAGGGTGTTGCAATTGTCCTTGTATTAAAAATCGATAGTTCATTGAAAAAAGAAAAAGAAAAAGCTATTAAATTTAATATCAACAATCGTTTAACATAAAAGCTCAAGCTAATGAATGACCCTACCAAAAGCTACATAATGTTGATCATGAACAAAATTCAGTGTTACTCAATTCAGCACTTGCTCTTGTGTACATAGATAGTGTAATTTGAACATCATCAATGCTGAATAGATGGTTTTGTTTGGAATGTACATCTATATACAATTTTATTCCACCTTTTTTGCTTTTACCATTTAAATATTTATGTACATCTCTATAATTTAAACACCTACATTCTGCAGGCTACTGCAAACCTATCTATTGAAACTCTTGAGAAAGGATTACTTACACCTAAAAGCAACGTATGGACTTTTGGCATCGTTTTACTCGAACTGCTCACTGGTCGAAAGCATTTGGACTCACGCCATCCAAAAGAAGAAAGAAACATAATAAAATGGAGCAAGCCTTTCTTAACCGATGACTGCCGCCTATCCTTAATAATGGACCCTAGAATCAAAGGGCGCTACCCTGTAAAAGCAGCCAGAACTATTGCTGACATTGCCTTAAAATGCATCCAAAAGGACCCTTCGGAAAGGCCTACCATGAGAACTATCGTAGAGTCACTGAAGAACGTTAAAGAGATCAAGTTCTCGTGTAGGTATCCTCTTCAAGAGCCTTCAGATGTGAGGAAGCATATGATGAAGTTTTCTAGCTTCAATGGAGTTGCTCAAGAAAATATCTCTAGTTTATCTCCACCTTTATCTTATACGACACAGACTTTAGATTCTGCAAGAAATTGTGCTTCGAATTATAGCATAGAACATATTCATAGGCTTTCCAATGCAAGAAAATCGTATTCTACTGTTGGGAGGCCAAGGGTTGAAGGGTTTTGATTGCTAAATGCTGTATTTTTTTTATTTTATTTTTTTTTGGGATTTTTTTTTTTTGGTTTTTTAATTTTTTTAGTAGCAATGATGCATTGTGGTATGATATACGTAATGTGCATGCTGGCATCCATCACCCATTTAGAATATGGGTAGAATGGGTGTTTGTATATATGGGTTGGGCTTAAACATCCTGCTGTTGTTGTATTCTTCAAATTTTGATGTTCTATATAATTTGTATAAGTTTAAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020252795.1	3.7e-194	probable serine/threonine-protein kinase PBL1
Swissprot	Q9LFP7.1	4.4e-51	Probable serine/threonine-protein kinase PIX7
trEMBL	A0A5P1FIC1	2.6e-194	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G08760.1	55.83	3e-145	511	ATSIK	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G00072	AT3G08760.1	489	196	10	1	473	3	487	55.83	3e-145	511
AfisC7G00072	AT3G28690.3	353	202	8	152	484	60	406	35.41	8e-55	211
AfisC7G00072	AT3G28690.1	353	202	8	152	484	11	357	35.41	1e-54	211

Ortholog group

Species	Genes
Allium cepa	g70908.t1
Allium fistulosum	AfisC7G00072
Allium sativum	Asa3G04907.1
Arabidopsis thaliana	AT3G08760.1
Oryza sativa	LOC_Os01g60700.1; LOC_Os01g60700.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	172	440	88.1	5.1e-25

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0042742	P	defense response to bacterium
GO:0004674	F	protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0005488	F	binding
GO:0006468	P	protein phosphorylation
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0045087	P	innate immune response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network