result

Gene information

Detail information of AfisC7G00122

Location

Gene	Chr	Start	End	Strand
AfisC7G00122	chr7	18829541	18831184	+

Sequences

CDS

>AfisC7G00122
ATGTCTCCGGGTCCCAACCCGAAAGGGGTGAAACGGGACCCGCCCTTCACCCGGGTCAACCTCCCGTCCTCCAAAATCCTCTTCAACAAGTACCAAGTCGGCCGCCTTTTGGGCTGTGGAGCCTTCGCAAAGGTCTACCATGCCCGCAACCTCCGGACGAACGCGAGCGTGGCCATCAAGTGCATCAACAAGGTGAGCGTCCTCAAAACCAACCTCGTTGCCAACATCAAGCGGGAGATCGCTATCATGCACCGCCTCCGACACCCCCACATCGTCCACCTCATCGAGGTCCTGGCCTCCCGCACCAAGATCTACTTCGTCCTCGAGTTCGTCAAGGGTGGCGAGCTCTTCTCCCGCATCTCCAAAGGCCGCCTCAACGAGGATGTCTCCCGAAAGATATTCCAAGAGCTCATCTCCGCCGTCGGATTCTGCCATTCCAGAGGCGTGTACCATCGCGATTTGAAGCCAGAAAACTTGCTCGTCGACGAGTTCGGCAAGGTTAAGGTCTCCGACTTCGGCCTGTCCGCGGTGTCTGATATGATACGTCCGGATGGCATGTTCCACACCCTCTGCGGCACCCCGGCATACGTGGCGCCCGAGGTGTTAACCAAAAAAGGATACGACGGTGCTAAGGTCGATATATGGTCGTGCGGCGTGATACTGTTCGTGCTTAACGCCGGGTATCTGCCGTTCAGCGACCCCAACCTGATGCAGATGTACAGGAAGATATACAAAGGTGACTATAAATTACCCAAATGGACGTCACCAGAGCTGAAGAGGTTGATATCAAGGCTTCTGGATACGAATCCGGCGACCAGGATAACGATAGAGGAAATCTTGCACGATCCGTGGTTCCACAAGGGTTTGGACGAGAAGAAGATGAGGGCGATGATGACATTTCACGCGGAGGTAGAAGATAGAATATCAAAAGTCGATCAGGCGGCGGAGTTGGATAGAGAACTTAACGCTTTCGACATCATATCATTGTCTTCGGGCTTCGACTTATCAGGCTTGTTCGACGGAAAGACCGAAAGGGCCCGATTCACTTCTGACGAGTCGCCGAGTGCGATACTAGAAAGAGTGGAGGAGGTGGGAAGAAAAGAAGGGTTGGTGGTGAGGAGGAAGAAGGAGAGGATAGGGAGAGGAGGGATAGCAGTTGAAGGGCAGAACGGTAATTTGGTGGCGTGGGTCGAGGTTTACAAACTGAGCCCGGGGATGGTAATGGTGGAGGTGGAGAAAGGAGGAGGCGATTCTGACGTGGAAGAGAGGTGGAATAGCGAGTTCTGGAAGGAGAAGTTAGGACCAGCTAGTGAACCGACCACGCCCATGTCGGGGTTTAGGGAGCGTGTTTTTGCCTTCGATATGATAGAGTCTTCGAGTGAGCCGGTGTCGCCCATGTCTGACTGTACTAAGTTTGTCGCTGTAGATTCCAGTTCAGAAACTGAATCTTCTAAGTAG

Protein

Gene

>AfisC7G00122
CCTTCCAAAAACATATCACAAAATTTAACAACCCCAATATCATCTAGCTAGCTCTCCTCCTTCTTTCCAACAATGTCTCCGGGTCCCAACCCGAAAGGGGTGAAACGGGACCCGCCCTTCACCCGGGTCAACCTCCCGTCCTCCAAAATCCTCTTCAACAAGTACCAAGTCGGCCGCCTTTTGGGCTGTGGAGCCTTCGCAAAGGTCTACCATGCCCGCAACCTCCGGACGAACGCGAGCGTGGCCATCAAGTGCATCAACAAGGTGAGCGTCCTCAAAACCAACCTCGTTGCCAACATCAAGCGGGAGATCGCTATCATGCACCGCCTCCGACACCCCCACATCGTCCACCTCATCGAGGTCCTGGCCTCCCGCACCAAGATCTACTTCGTCCTCGAGTTCGTCAAGGGTGGCGAGCTCTTCTCCCGCATCTCCAAAGGCCGCCTCAACGAGGATGTCTCCCGAAAGATATTCCAAGAGCTCATCTCCGCCGTCGGATTCTGCCATTCCAGAGGCGTGTACCATCGCGATTTGAAGCCAGAAAACTTGCTCGTCGACGAGTTCGGCAAGGTTAAGGTCTCCGACTTCGGCCTGTCCGCGGTGTCTGATATGATACGTCCGGATGGCATGTTCCACACCCTCTGCGGCACCCCGGCATACGTGGCGCCCGAGGTGTTAACCAAAAAAGGATACGACGGTGCTAAGGTCGATATATGGTCGTGCGGCGTGATACTGTTCGTGCTTAACGCCGGGTATCTGCCGTTCAGCGACCCCAACCTGATGCAGATGTACAGGAAGATATACAAAGGTGACTATAAATTACCCAAATGGACGTCACCAGAGCTGAAGAGGTTGATATCAAGGCTTCTGGATACGAATCCGGCGACCAGGATAACGATAGAGGAAATCTTGCACGATCCGTGGTTCCACAAGGGTTTGGACGAGAAGAAGATGAGGGCGATGATGACATTTCACGCGGAGGTAGAAGATAGAATATCAAAAGTCGATCAGGCGGCGGAGTTGGATAGAGAACTTAACGCTTTCGACATCATATCATTGTCTTCGGGCTTCGACTTATCAGGCTTGTTCGACGGAAAGACCGAAAGGGCCCGATTCACTTCTGACGAGTCGCCGAGTGCGATACTAGAAAGAGTGGAGGAGGTGGGAAGAAAAGAAGGGTTGGTGGTGAGGAGGAAGAAGGAGAGGATAGGGAGAGGAGGGATAGCAGTTGAAGGGCAGAACGGTAATTTGGTGGCGTGGGTCGAGGTTTACAAACTGAGCCCGGGGATGGTAATGGTGGAGGTGGAGAAAGGAGGAGGCGATTCTGACGTGGAAGAGAGGTGGAATAGCGAGTTCTGGAAGGAGAAGTTAGGACCAGCTAGTGAACCGACCACGCCCATGTCGGGGTTTAGGGAGCGTGTTTTTGCCTTCGATATGATAGAGTCTTCGAGTGAGCCGGTGTCGCCCATGTCTGACTGTACTAAGTTTGTCGCTGTAGATTCCAGTTCAGAAACTGAATCTTCTAAGTAGGTGTTGTTTAAAGTTTAGGTTTTGTCAAAGATTTTGCCGTTTGGGGTTGTAAAATTATAATGTAAGAGCAGATATATTGTACATTGTATATAATAACTTATTAATGGAAGGAAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020683887.1	3.5e-151	CBL-interacting serine/threonine-protein kinase 14
Swissprot	Q9LZW4.1	1.0e-134	Serine/threonine-protein kinase SR1
trEMBL	A0A835ULS9	1.5e-159	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G30360.1	59.61	2e-138	489	CIPK11;PKS5;SIP4;SNRK3.22	SOS3-interacting protein 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G00122	AT2G30360.1	411	147	9	27	428	17	417	59.61	2e-138	489
AfisC7G00122	AT4G18700.1	465	195	4	26	465	21	479	51.40	4e-130	461
AfisC7G00122	AT5G01820.1	392	138	6	27	413	18	401	61.48	5e-129	458

Ortholog group

Species	Genes
Allium cepa	g21077.t1
Allium fistulosum	AfisC7G00122
Allium sativum	Asa3G04744.1; Asa3G04748.1
Arabidopsis thaliana	AT2G30360.1; AT5G01820.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	31	285	239.1	4.8e-71
PF03822.11	NAF	Domain	320	373	75.5	2.4e-21

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0001077	F	transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0003729	F	mRNA binding
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005773	C	vacuole
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005986	P	sucrose biosynthetic process
GO:0006396	P	RNA processing
GO:0006979	P	response to oxidative stress
GO:0009268	P	response to pH
GO:0009409	P	response to cold
GO:0009414	P	response to water deprivation
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009737	P	response to abscisic acid
GO:0010150	P	leaf senescence
GO:0010325	P	raffinose family oligosaccharide biosynthetic process
GO:0010540	P	basipetal auxin transport
GO:0016607	C	nuclear speck
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0019593	P	mannitol biosynthetic process
GO:0035061	C	interchromatin granule
GO:0042538	P	hyperosmotic salinity response
GO:0043565	F	sequence-specific DNA binding
GO:0045944	P	positive regulation of transcription from RNA polymerase II promoter

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Bacterial secretion system	ko03070
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Biofilm formation - Pseudomonas aeruginosa	ko02025

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network