Gene | Chr | Start | End | Strand |
---|---|---|---|---|
AfisC7G00219 | chr7 | 39024854 | 39032467 | - |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | XP_020243649.1 | 8.3e-259 | uncharacterized protein LOC109821903, partial |
Swissprot | F4IXE7.1 | 1.9e-74 | Repressor of silencing 4 |
trEMBL | A0A5P1FI24 | 2.0e-230 | PHD-type domain-containing protein |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT5G58610.1 | 43.09 | 1e-99 | 362 | PHD finger transcription factor, putative |
Species | Genes |
---|---|
- | - |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF05641.9 | Agenet | Domain | 26 | 101 | 52.3 | 5.4e-14 |
PF16135.2 | Jas | Family | 610 | 673 | 56.7 | 1.9e-15 |
PF00628.26 | PHD | Domain | 723 | 764 | 29.1 | 6.2e-07 |
Accession | Ontology | Name |
---|---|---|
GO:0000790 | C | nuclear chromatin |
GO:0000792 | C | heterochromatin |
GO:0000978 | F | RNA polymerase II core promoter proximal region sequence-specific DNA binding |
GO:0000980 | F | RNA polymerase II distal enhancer sequence-specific DNA binding |
GO:0001103 | F | RNA polymerase II repressing transcription factor binding |
GO:0001221 | F | transcription cofactor binding |
GO:0016020 | C | membrane |
GO:0004003 | F | ATP-dependent DNA helicase activity |
GO:0004402 | F | histone acetyltransferase activity |
GO:0004407 | F | histone deacetylase activity |
GO:0005737 | C | cytoplasm |
GO:0005665 | C | DNA-directed RNA polymerase II, core complex |
GO:0005813 | C | centrosome |
GO:0008270 | F | zinc ion binding |
GO:0008285 | P | negative regulation of cell proliferation |
GO:0009506 | C | plasmodesma |
GO:0010385 | F | double-stranded methylated DNA binding |
GO:0016581 | C | NuRD complex |
GO:0021895 | P | cerebral cortex neuron differentiation |
GO:0031492 | F | nucleosomal DNA binding |
GO:0032993 | C | protein-DNA complex |
GO:0035093 | P | spermatogenesis, exchange of chromosomal proteins |
GO:0036091 | P | positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress |
GO:0042826 | F | histone deacetylase binding |
GO:0043967 | P | histone H4 acetylation |
GO:0043971 | P | histone H3-K18 acetylation |
GO:0043972 | P | histone H3-K23 acetylation |
GO:0044030 | P | regulation of DNA methylation |
GO:0044154 | P | histone H3-K14 acetylation |
GO:0045595 | P | regulation of cell differentiation |
GO:0060850 | P | regulation of transcription involved in cell fate commitment |
GO:0061628 | F | H3K27me3 modified histone binding |
GO:0080188 | P | RNA-directed DNA methylation |
GO:0098532 | P | histone H3-K27 trimethylation |
GO:1901798 | P | positive regulation of signal transduction by p53 class mediator |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
- | - | - | - | - |