result

Gene information

Detail information of AfisC7G00389

Location

Gene	Chr	Start	End	Strand
AfisC7G00389	chr7	74818015	74819126	+

Sequences

CDS

Protein

Gene

>AfisC7G00389
GTCATCTCCAAGAAAAAAAGAAAACCCAGAACCTCATCATGGAAATGAAGGAGAGGCAACGGTGGCGATCGGAAGAAGACGCGATCCTCCTCTCCTACGTTCATCAGCACGGCCCCCGCGACTGGCACCTCATCTCCCACCGCATGAACGCTCCCCTCCACCGCGACGCCAAATCCTGCCTCGAACGCTGGAAAAACTACCTCAAACCGGGCCTCAAGAAGGGATCCCTCACCCCCGACGAGCAGCGCCTCGTCATCGCTCTCCAGCGCAAGTACGGAAACAAGTGGAAGAAGATCGCCTCCCTCGTGCCCGGCCGCACCGCCAAGCGCCTTGGCAAGTGGTGGGAGGTCTTCAAGGACAAGCAGCACCGCGAGGATCAGCTCAAGCTCAAACTCGCATCCAGATCTGATCCCATCCACATCCAGCCCAGCGTCAAGTACGATCGAATCTTGGAATCCTTTGCGGAGAAGCTGATGCAGAATCCAGATCCGCCGATAATGGTTCCGGATCCGCCGATTTCGGTGGCACTGACGTTGGCGCCGGCGCCAATTGGGGAATTCGGGGGATGGTGGAAGGAGGTGGAGGAGGGGTATGAGGTATGGGCGGCGGAGAGGAAGGAGGCGGCGTGGAGGGTGAGGAGGATGGAGCTGCAGTTGGAGGCGGAGTGGGAGGGGAAGAAGAGGGAGAAGAGGGAGGAGATGGAAAGAAGGATAAAAGAATTGGAAGAGGAAAAGAGGAGAGAGTTGGAGAGAATCGAGATTGACTGTGCGGAAACGATGAGGAAAATGAGGATGGAGGCTGAGGCGAAGGAGACGAGGTTGATGGAGACGTGGCGCGATAGGCACGTGCGGTTGAGGAAGGTGGTGGATCGTATGATGGTGACGAAGGGTGGTGGAATCGGACGGTGAGATTTTTTTTCTTGTTTTTGTTTCTTTTTTTTATTTATAATTGTAATGAGCATCGTTTTGTTTTGTATATAGTTTGGCTTTTTTTTTTGATTTTTGAAAATTAATAACTTTGCTACCAGATTGTTAGTAAAGCATGGAAATTGCGTGGCTAATGTAATGTTGGATGTTTAGTTGTTAATCAGTTACTGCAAGAATCAAGCGGGA

Functional annotation

Database	accession number	e-value	annotation
nr	GER57267.1	8.7e-65	MYB-related transcription factor
Swissprot	Q94IB1.1	2.7e-55	Protein PHANTASTICA homolog
trEMBL	A0A5A7RJ66	6.3e-65	MYB-related transcription factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G37630.1	45.23	6e-73	270	AS1;ATMYB91;ATPHAN;MYB91	myb-like HTH transcriptional regulator family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G00389	AT2G37630.1	367	105	6	3	280	1	360	45.23	6e-73	270
AfisC7G00389	AT1G08810.1	130	70	3	9	137	17	141	41.54	9e-22	100
AfisC7G00389	AT2G32460.1	96	49	1	9	104	23	116	46.88	3e-21	99.0

Ortholog group

Species	Genes
Allium cepa	g151509.t1
Allium fistulosum	AfisC7G00389
Allium sativum	Asa3G04583.1
Arabidopsis thaliana
Oryza sativa	LOC_Os12g38400.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13921.3	Myb_DNA-bind_6	Domain	9	70	51.1	1.1e-13

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0009555	P	pollen development
GO:0009628	P	response to abiotic stimulus
GO:0009686	P	gibberellin biosynthetic process
GO:0009740	P	gibberellic acid mediated signaling pathway
GO:0009751	P	response to salicylic acid
GO:0009789	P	positive regulation of abscisic acid-activated signaling pathway
GO:0009860	P	pollen tube growth
GO:0009867	P	jasmonic acid mediated signaling pathway
GO:0009965	P	leaf morphogenesis
GO:0010026	P	trichome differentiation
GO:0016036	P	cellular response to phosphate starvation
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0043068	P	positive regulation of programmed cell death
GO:0043232	C	intracellular non-membrane-bounded organelle
GO:0080086	P	stamen filament development
GO:0090406	C	pollen tube
GO:0098542	P	defense response to other organism

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network