result

Gene information

Detail information of AfisC7G00550

Location

Gene	Chr	Start	End	Strand
AfisC7G00550	chr7	106635069	106638594	-

Sequences

CDS

Protein

Gene

>AfisC7G00550
ATGGTACTGAGAATAACAATAATACAATTTTACTATTTCTTCAATACTGACCCCAATTTCACTGATTCTACTTGGCCTGAAGTGTCTCCTGAGGCCAAAGATTTTGTTAAAAGGCTTCTAAATAAGGATTATAGGAAAAGGATGACAGCTGCACAAGCTCTAAGTATGTGTATAAATAGTAGTCTCGGAAAGGCTTCTCTTTTCTTTCTTCTTCTTCTTTTGTTTATGTTGTATGCAAAAATTTCTGACATAATTTTTTTGTATGATGTCAGCTCATCCTTGGTTAAGAGACATGCAACAGCAAATCCCATTAGATATACATGTCTATAAATTAGTGAAAACTTACTTACGAGCGACTCCGTTCAAGCATGCTGCTTTGAAGGTCTTTAATCCTTATACTAATTTTTTCTAGTGTTTAATAAGGAATAGCCCTACGTTATGTTTGTTTTATTATAGGTACTCTTCAAAACCCATGGCACCCTTCACTTATAGCCATGATGAGTCATATAACATAATTTATAGAATATCATCATTATTTAGCTAACTACAAAGTTCACTTTTGAACCGATAGGTCGGCACCTTGTCATGTAATACCCACACAGAGACAAACACACACTGCCAACATCACATATACACAACAACAATGACAACAACAACCACAAAAGTCCACATTATTGCTAGAATCGGTCATTTTTGTAACTTGGGATATCCAAGTGAAAGTCTGCTTCTTAGATTGATCACTCAGGGATCCCCACTGAACTTTGTTAACCAAGTGTCACCTTGTTTTGATTGTCCTTTTATCTATTATTCCCGGCAACTTGTTTATCATTTTTTTTTTATAACCTATAAAAACAGTGCTAGTGTTTAATTAGAAAAGAGCTGATATGATGCTGATCCAGGGAGAAGGTTGCTATAGATTTGCTAGAATTCACCAATTATTTTCTTGAAGTAGTTGCAGTTTGTGTAAACTATAGTACCTTATGCAATTTGACCTTTTTTCCTCCTTTTTTTTACACCCACCTTCTTACTTCCTTCTTAAGGCTCTATCTAAAGTTCTAACAGAGGACGAGCTTATATATCTAAGGTCACAATTTGACTTATTGCAACCAAATAAAGATGGACGGGTATCTTTTGAAAATTTTAAAACGGTGAGTGAATTCTTTGTCCTGCAAAACAGAATTTTTATTTGTTTATTTATTGTTTACAATTATTGTTGACTTGTATGATCAACTGTTGTGTAATTTAAATTATAGGCATTACTGCATAATGTAACGGATGCCATGAAGGAGGCTAAGGTGTACGATATCTTACCTACGGTATGATAAAGAATTTATTAATTTAACATGAATTCGTAACTGTTGGTTCAAGCCCGTGCAGTTAAAGCGCTTAGCAATTTTATAGCGGTGGAGGTGCAAAAAGTTATAGCGGTGATATAACGGAAAATAATGGAGGTGCAAAAGGCTTTATTAGATATAAAACCAAATATTAAAATTAACTTATTCTCATTTTCACAACATTTGAGTAGGAAAAAGAATATTGTTTAATCTTATATAACGCAACAGAAGAATATCATGATTTATGCAGTTCAGATTTGGTAATCACAATAGATTTTTAACTTATATTGAACATTTATACCTTAAAATTAGATCTTTACCCTAACTTTGTTGATTTGGTTCAAAAGAGAACTAGTCAAATCAACATTTTTTATATTAATGTTGCTAAAACGAATGCTAAAAGACCTTGATTTAGCGGGTGTAGCGGAAAATAGTGGGGCTTAAAATAGGTCTATTATTTATTAGCGCTATACTGAAAAATCGTAGCGGTCAAAAAATGCCATGTGCTATAGTGGAGATTTTGCGGGGCTTTAACTGCACAGGTTCAAGTACAACAAATTATTCATTTCACTACTAGTATATCACATACCATGCTCATTGATACTAAAAATTATATTATAACAATAACCTTACCACAACTGGTCCATCTAGGGAAAGAAGGTGGCCATCTTTTTTCTGCTTCAGATATCTCTGCGTTTAATCATATAATGTTTATAAATTATTGCAATGCTTGCAAATTACAACAAGTCAAAGCTTGCGTTCTTGATATATTTTTAACATGGATTATTCACCAAAAGGTAACTGATATCCTCTCTTTGGGAACAAAAGTCAATGTACTTTTCTCTCGTATAATCATCATCATCATTATTTTGAGTTACCTTCATTAAAAACTAGCGCACCTACACAATCTTTCATCATCATCATCGTATCATTTTGAGTTACCTTTATTAAAAACTAGCACACCTACACAATGAGCTGTGTACAAAACTTGTTTGCCCTTTCAATAAAATAAAAATAAAATATACAAATCAAATCATAACCATATCCAGTATATATTCGTACATTATGTATGTAAGCTAATGATGTTTTGCATAATATCATGTAAAACTATAAATATGCTACTTTTGCGATCCAGTAGTGTTATAAATGAATTGATATTGATGTTTAATATTTCTGTTATATTTAATGTGTAGCTCACTACCTCCGTGCAAGAAGTTATATCAAACAAAATTTAATCATAAAACTAAGACCAAAACAACAGCGGAAATATTGAAGTAAATCTTTTTATTGACGGTTTGAATTGGAAAATTTGTCATTGGGTAATTTCATTTTTTTTAAATCTACGGTTTAAAATTTGATTGAAATCTGGGATATCTAGTCATTTATACCTATGAAAGGTATAAATGAGTAAATGTACTTTTTTTGAAAGTGTAGATACACTTGTGTCAAAATTATCATTTTATTTTGAAAAAAAAAACAAACAAACAAACAAAGTATCATTAATGAATGGGTTTGATACATAATTAGAAAATGCTAAATTGAGGTGGTAAATCTTGAAATGTCCCTTTTTTATGTGATCAAGATATTTAAGATTGTAATTGTCATGATCTAGCTTCATGAAAACATGTTCTTAAATTATCCAGTTGGAGCCACTTACCTATAGAAAAGCAGACTTTGAAGAGTTCTGTGCTGCAACAGTTAGTCCTTATCAATTGGAGGCATTAGATAACTGGGAGAAAATTGCCTGCACTGCCTTCGAGTATTTTGATCTAAAGGGAAATCGTGTCATATCTGTCGAAGAACTAGCACAGGTAATATAATATATAATAATTTATATATACATGTTTGTATGTGTGGTGCGTGTTTCCATAATGGGCACCGATCCCCTAGAGTTGGAGAAATCTAGTGGAACGCCTTCCGTAACTCTTTCCCATTGTTATCACAATTCCGATTATCCAGTTTGTCATACATGTCATAACTTATGAAGCATGTTTGCGTGCGCTATAAAGAACAATAAGTTGATCCTTTTTTCGTAGAAAGGGGCTAAAACCCATGTCAGGATCTGACAACTGCGAGACTAGGTAAATTGCACAATTCGAAATACAATATTACCGTGGTTTAAAAAGTTGAGGAGCGAAGGGATGGACTTAGTAGGAGTGGAATCCAGCGATAAGCTTAAGAGCCAACCTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_029119942.1	1.6e-80	LOW QUALITY PROTEIN: CDPK-related kinase 3-like
Swissprot	Q9ZUZ2.1	3.6e-69	Calcium/calmodulin-dependent protein kinase 4
trEMBL	A0A8N4EVR9	1.2e-80	LOW QUALITY PROTEIN: CDPK-related kinase 3-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G46700.1	65.13	1e-67	252	ATCRK3;CRK3	CDPK-related kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G00550	AT2G46700.1	195	68	0	10	204	356	550	65.13	1e-67	252
AfisC7G00550	AT2G46700.2	195	68	0	10	204	132	326	65.13	5e-67	250
AfisC7G00550	AT5G24430.1	194	76	1	10	203	356	548	60.31	8e-65	243

Ortholog group

Species	Genes
Allium cepa	g128878.t1
Allium fistulosum	AfisC7G00550
Allium sativum
Arabidopsis thaliana	AT2G46700.2
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	17	59	30.6	1.9e-07

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0005509	F	calcium ion binding
GO:0051015	F	actin filament binding
GO:0006952	P	defense response
GO:0005576	C	extracellular region
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0004702	F	receptor signaling protein serine/threonine kinase activity
GO:0004723	F	calcium-dependent protein serine/threonine phosphatase activity
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005885	C	Arp2/3 protein complex
GO:0009506	C	plasmodesma
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009825	P	multidimensional cell growth
GO:0009931	F	calcium-dependent protein serine/threonine kinase activity
GO:0010090	P	trichome morphogenesis
GO:0010150	P	leaf senescence
GO:0010286	P	heat acclimation
GO:0018105	P	peptidyl-serine phosphorylation
GO:0034314	P	Arp2/3 complex-mediated actin nucleation
GO:0046777	P	protein autophosphorylation
GO:0080092	P	regulation of pollen tube growth

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network