result

Gene information

Detail information of AfisC7G00554

Location

Gene	Chr	Start	End	Strand
AfisC7G00554	chr7	108205753	108209404	-

Sequences

CDS

>AfisC7G00554
ATGGACATGCAATCCATCCTCATATTCACCCTCCCATTCGTCACCCTCCTCTTCCTGGTCATTACCAGCCGCCGCAGGCCCAAACTCCCGCTCCCGCCTGGCCCACGCCCACTGCCCATCATCGGCAACCTCAACCTCATCGACAAACTCACCCACCGTGGCCTGGCCCATCTGGCGAACCAATACGGTGGCATCTTTCACCTCAAGCTCGGGTCCGTCCACACCTTCTCCATCTCCACACCCGAAATCGCAAAGGAGGTCCTTCAAACCCAGGACCTGGCCTTCTCCAACCGCCCCGCCACCATCGCCATCACCTACCTCACCTATGACCGGGCCGACATGGCCTTCACCCACTACGGCCCGTTCTGGCGCCAAATCCGCAAGCTCTGCGTTATGAAGCTGTTCAGCCGGAAAAGAGCGGAGTCATGGGCTTCCGTCCGGGAGGAGATAGAAAAGGCTGTATCGACCGCAGCCGCAGGCGCTGGGACTGTGGTCAACGTAGGGGAGCTGGCGTTCAATCTGACGAAGAATATAACGTTCAGGGCGGCGTTTGGAGCGAAGTCGGGCGAGGAGCAGGATGAGTTTCTGGGGATTTTGCAGGAGATATCAAAGCTGTTTGGAGCGTTTAATGTCGGGGATTTCGTACCGGGTTTGAGGTACTTGGATCCGCAGGGGATAGGGAGGAGGATGAGGAAGGTGAGGAAGGAGCTGGATGGATTTATTGACAGGATAATAGATGAGCATGTGCAGAATAGGAAGGAGGTGGATGATGTGGAGGCCGACATGGTGGATGAGATGTTGGCGTTTGTTGGACAAGGGAAGAGCATTGGTAAGGATTCTGATGAGTTGAGGCTTACTAGGAATAATATCAAGGCTATTATCATGGACGTAATGTTCGGAGGAACAGAGACAGTGGCCTCGGCAATAGAATGGGCAATGGCAGAGCTCCTTAAAAGCCCAGAAGACCTCAAAAGGCTCCAGCAAGAACTGACCTCGGTAGTGGGCCTGGACCGCAAAGTCCAGGACTCCGACCTCGACAAACTGCCGTACCTCAAATGCGTCATCAAGGAAACGCTGCGACTTCATCCACCGATCCCGCTTCTTCTCCACGAAACAGCGGAGGACTGCGAGATCCAGGGCTACTCGATCCCCAAAAAATCGAGGGTAATGATCAACGTGTGGGCGATCGGGCGCGACAAGTCCGCCTGGAAGGACGCGGACCAGTTCAAGCCGTCGAGATTCGCGAAGGGAGGGGAGTACGAGCAAGTGGATTTTAAGGGGAATTTCTTCGAGCTGCTGCCGTTTGGGGCGGGGAGGAGGTCGTGCCCGGGGATGCAGCTGGGGCTGTACGCGCTGGACCTGACGGTGGCGAATATGGCGCACTGTTTCGATTGGGAGTTGCCGGACGGGATGAAGCCAGGCGAGATGGATATGAGCGATGTGTTTGGGTTGACTGCGCCTAGGGCTGTGAGGCTCGCGGCTGTGCCTACTCCTAGATTGACTTGTCGTATTTGA

Protein

Gene

>AfisC7G00554
TTCAAACACAAGAACTCTTCCCCTCGCATACACAAAGCTCAAAGAAACAAAACCAAAGCCATAATGGACATGCAATCCATCCTCATATTCACCCTCCCATTCGTCACCCTCCTCTTCCTGGTCATTACCAGCCGCCGCAGGCCCAAACTCCCGCTCCCGCCTGGCCCACGCCCACTGCCCATCATCGGCAACCTCAACCTCATCGACAAACTCACCCACCGTGGCCTGGCCCATCTGGCGAACCAATACGGTGGCATCTTTCACCTCAAGCTCGGGTCCGTCCACACCTTCTCCATCTCCACACCCGAAATCGCAAAGGAGGTCCTTCAAACCCAGGACCTGGCCTTCTCCAACCGCCCCGCCACCATCGCCATCACCTACCTCACCTATGACCGGGCCGACATGGCCTTCACCCACTACGGCCCGTTCTGGCGCCAAATCCGCAAGCTCTGCGTTATGAAGCTGTTCAGCCGGAAAAGAGCGGAGTCATGGGCTTCCGTCCGGGAGGAGATAGAAAAGGCTGTATCGACCGCAGCCGCAGGCGCTGGGACTGTGGTCAACGTAGGGGAGCTGGCGTTCAATCTGACGAAGAATATAACGTTCAGGGCGGCGTTTGGAGCGAAGTCGGGCGAGGAGCAGGATGAGTTTCTGGGGATTTTGCAGGAGATATCAAAGCTGTTTGGAGCGTTTAATGTCGGGGATTTCGTACCGGGTTTGAGGTACTTGGATCCGCAGGGGATAGGGAGGAGGATGAGGAAGGTGAGGAAGGAGCTGGATGGATTTATTGACAGGATAATAGATGAGCATGTGCAGAATAGGAAGGAGGTGGATGATGTGGAGGCCGACATGGTGGATGAGATGTTGGCGTTTGTTGGACAAGGGAAGAGCATTGGTAAGGATTCTGATGAGTTGAGGCTTACTAGGAATAATATCAAGGCTATTATCATGGTATTTCCTCCTTCTTCTTCTCCTTCTTCTTTATGTTTATTAGTTATTATACTCCACAAAACCATGCATGGAATATACATTGCTTATCATGACTTTATTCAGTTAAATGGCAAAATATATTCAGCGACGATTCCAATTTATTTTTTATTCTTTAAACTAAATTCTCGGTCAACTATAGACTTTTCGAAATTTGTGTACAATATTAGTCTGTTGATGTTTCTAACTTTTCGAATATTCGTTTGAGAACATCCTAGCTCTCTCTGAGAAACTGAAATTGTTTTTGTAGTATTATTATGTATGAAACTAATAATTGAGCTTTTTAATGAACTTAAATTTTTTATAAAGTGAAGCTTACCTGAGTATATAATAAACTTCTATGAAAAAATTAAAATTTACTTTAATTTTCCCATTTGAAAGTTTAGACATTATTTTAGTAGTACTCGAAATTTGTAGTTGCCCTATGGCTTTTTATATTTTTCTGAAAAGTATAAAAAATTATTTTTAGATCCATAAATCTCTACATTCACACTTTGGAGAATTACCACTATATGGCAATTGTTAATTGTTAGAATAGTTATGAAAAATTAGTCTGACAGATATGACACAACATTTAGTGAATTTGACATTATTATGAAATAATTATTGTTCCTATATAACCTTTTATTTACAGACTTTTATTTTGAATATATTTAAAATCTAAAATTACACTTTTATTATAATATTTAAACTCCATGTTTATTTGGATAATCATATAATTAGAAAGCTGAAAATAGAAAACACCAAGGTTTGTTTATGAAAAAATCTTTTGTTAGTCAAAATAATGTTAAGGATTATCAATAACATAAATAGCATAGATAATGGTCGAAATATTTTAATATTAGAACTTGGTTTTATTTAAAATAAAATTTTCAAATTTTGCTTTATTAGCTTACCTAAAAATACACAGTGTCTGACACCAACGTTTTAACATTTTCTTTCTTCCTTACTATTTTGTGTTGATGATTAGAAAGTGCAATCAAAATTTGTATCCTATAATAATTTTTAGGTTGTCATAATTATAAATCATATCTTTTATACCACATGCATAAAATTTAAACATAAAAAACAAAGTGGACCAGAAATGATCTTGCCACAATTGGTATACATATTCATACTCAAGTTCAATTTTAATGTCAAGAATGAAGACTAACCCTTTTGAATTCTTCCTACATGTCTTTTCATCGTGTAATAATTTTGACCATAAAATGTATTAAGTATGAATTTAATTACAAAATTATATGATTTTTGGTATCATTACATTAAAAAAGTAGATGTTAATTGTAACATGGTTCAAACCCAAATAATTTAACTGAAGGGGTTAGTCATATGTAGAGCAGACAAAGGGAATTGTACAGATATTTGCATAGCATGAATCCCATAGTAAGAAATGTGGGTTCAAAATTCTTACTTGAGTTCAATGGTCATCCAACTATAACCATCAATCTATTAAGACAGGTATACGTCCAAATCCAAATACACAGCAACGCACGCAGTTCAACAAAATGGACGTACCTTTCAACAACGCATGCACATTCCTTCATTGTGCGTTGACCCCAGCCAATATAATCATCATCATAATGAATGAAACATTAACTTTCCTGTTTTAAAATCAGCACTAGTAAATTTATATTGCTTTCACATCAGGACGTAATGTTCGGAGGAACAGAGACAGTGGCCTCGGCAATAGAATGGGCAATGGCAGAGCTCCTTAAAAGCCCAGAAGACCTCAAAAGGCTCCAGCAAGAACTGACCTCGGTAGTGGGCCTGGACCGCAAAGTCCAGGACTCCGACCTCGACAAACTGCCGTACCTCAAATGCGTCATCAAGGAAACGCTGCGACTTCATCCACCGATCCCGCTTCTTCTCCACGAAACAGCGGAGGACTGCGAGATCCAGGGCTACTCGATCCCCAAAAAATCGAGGGTAATGATCAACGTGTGGGCGATCGGGCGCGACAAGTCCGCCTGGAAGGACGCGGACCAGTTCAAGCCGTCGAGATTCGCGAAGGGAGGGGAGTACGAGCAAGTGGATTTTAAGGGGAATTTCTTCGAGCTGCTGCCGTTTGGGGCGGGGAGGAGGTCGTGCCCGGGGATGCAGCTGGGGCTGTACGCGCTGGACCTGACGGTGGCGAATATGGCGCACTGTTTCGATTGGGAGTTGCCGGACGGGATGAAGCCAGGCGAGATGGATATGAGCGATGTGTTTGGGTTGACTGCGCCTAGGGCTGTGAGGCTCGCGGCTGTGCCTACTCCTAGATTGACTTGTCGTATTTGATTTCAACATGTACATACGATTTGTGTTTATATATACGTTATCAAGTATACACAACGGTGATTGTTTCTATAATTGTGCTGCTGTTCCATGGTGCGGAATAATAAAAATGTTCAATGAGGGGGTTTTGAAAGACGCATGGTGTATGTGAATTGTAAATTTATATAATTGTTACTTCGTCATTACTGAAACTTTTTCATGTGGCAAATTTTCTTCTACTAAAATTGATGCAATATCTTTGCTTCTACATTGTATTGGACAAATGGAGTCTCCATTAACGGATTAAAAATAAGTGTTAAACATCCGTCCCAACCGCAGTTAATCTTCGAACGTAAAGCACTGTCGTTCTGAAAATAAAATAACATTATGCATGCATCAATCAACAATTTAATCT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020267813.1	2.7e-215	LOW QUALITY PROTEIN: cytochrome P450 84A1-like
Swissprot	Q42600.1	3.3e-189	Ferulate-5-hydroxylase
trEMBL	A0A248SMI8	4.4e-207	Cytochrome P450 84A1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G36220.1	64.71	0.0	644	CYP84A1;FAH1	ferulic acid 5-hydroxylase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G00554	AT4G36220.1	476	155	4	39	504	48	520	64.71	0.0	644
AfisC7G00554	AT5G04330.1	484	190	7	30	504	31	509	57.85	7e-164	573
AfisC7G00554	AT5G07990.1	512	286	7	5	504	2	507	40.62	4e-108	388

Ortholog group

Species	Genes
Allium cepa	g152076.t1
Allium fistulosum	AfisC7G00554
Allium sativum	Asa2G00330.1; Asa3G04424.1
Arabidopsis thaliana	AT4G36220.1
Oryza sativa	LOC_Os03g02180.1; LOC_Os10g36848.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	32	487	329.2	3.5e-98

Gene Ontology

Accession	Ontology	Name
GO:0000038	P	very long-chain fatty acid metabolic process
GO:0005515	F	protein binding
GO:0016021	C	integral component of membrane
GO:0005576	C	extracellular region
GO:0005506	F	iron ion binding
GO:0005789	C	endoplasmic reticulum membrane
GO:0055114	P	oxidation-reduction process
GO:0006633	P	fatty acid biosynthetic process
GO:0009733	P	response to auxin
GO:0009809	P	lignin biosynthetic process
GO:0010224	P	response to UV-B
GO:0019825	F	oxygen binding
GO:0016711	F	flavonoid 3'-monooxygenase activity
GO:0020037	F	heme binding
GO:0043069	P	negative regulation of programmed cell death
GO:0046424	F	ferulate 5-hydroxylase activity
GO:0080132	F	fatty acid alpha-hydroxylase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09755	CYP84A, F5H; ferulate-5-hydroxylase	EC:1.14.-.-	Phenylpropanoid biosynthesis	ko00940

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network