result

Gene information

Detail information of AfisC7G00629

Location

Gene	Chr	Start	End	Strand
AfisC7G00629	chr7	121713869	121717817	-

Sequences

CDS

Protein

Gene

>AfisC7G00629
GAGCAATGAAGCTTTGTGACCTGATACACCAATTATTTTATCCACCGTTTCTATATAAATCTCCATTAATAACCACTTTTCCTTTCGGTTCCGCGAACAGCCAACAAAAAATATCTGAAAAATAATAATTGAAAATTCACTACAAATAATGTATGGATCTTCAGCACAAGCGGATCTCAACCGTTCGTTTCCTCCAATGGGTTCAGGTCTGCTCCGCTACAGATCCGCTCCGAGCTCGCTCCTCGCTGAAATCTGCGACGACTTTATCCCAGATTCCGACTCCATCATTGCCAGATTCCTCTCCTCTGATCTTGGTACCTCCTCCGATGCCTCAGTTGAAGTCAACGCCCAACTTCCGCCGCCGCCACAAGCTCCGGTTATGTACCAGAGTCTTACCCCGCCTACGTCTGAACAAGCGAAAAATAATGGCGGCAACTGTTCTGGTGGGTTGATGAGACAGATGAGCTCCCCAGCTGGATTTCTATCTCAGATTGATTCTAGTGGTAGTGCTTTGATTCATTATTTTAGTTCGGATCGAATGAGCGAACTAAATAAAGAACTTTGTACTTTTTTTGTGTGTGTGCAGGATATGGAATTATGAGGGGTAATAGTAGTAACAATAGATTGAAGAGGCAAGGTTCTATGATGTCTCAGATTTCAGAGAATGAATCAATCGATGACTGGGAAGATTCTAAGATTAACTGTAATTTTTCGCCCATTAAAAGGGCTAGAGAAAGCGGAACTGAGCAGCAGGTTCTTACTTTTATAATTATCAGTTTCGTTTCATGATTTCTTCTTTTAGATTGATTTTATGTGAAATTTTTATGTTGAACAGAATGGGCTAAGTCATCAGTTGAGTTTGCCAACAGAGATGGATGCAATGGAAAAGTTTTTACAGTTCCAGGACTCCGTGCCTTGCAAAATTAGAGCAAAAAGAGGGTGTGCTACACATCCAAGAAGCATAGCGGAAAGGGTGCTTTGCTGTGATTTAATGATTCTTAGTAAATATCTAGTAGATTTTGTTTGAGGTATTACTTAATTGATTTATTGTGTTTTGATCTTAATGTTAGGTGAGGAGGACAAAGATTAGCGAAAGGATGAGAAAGTTGCAGGAGCTTGTCCCCAACATGGATAAGGTATCTTTAAAAGGCAAATACTATGTCAATAATTTGTGGTATTTTCTATTTTTGGTAATTTTGGATGTATAGCTAGAAATCTATTACGTTATATTTCTTGTAACTTGTACTTGGTCCTCTTGTAGAGCGTAGCCTGTGTACTTGTTTACTCATTTTGCTTCTATTCTAGAAAGTGAATAAGAGTAGCTTTGGCACCAACTTTTCTTATGGCCAAGTTAAAAGTAGTTATGAGCTGCAACTTCTATGTGGTTATACGTGACTAGTAAAATAGGAGGATGTTTAGATAATTTAAAAATCAAGTGTACTTGTTATTAAAGTTTTTAATGGAAATAGGTTATGTTTGTTTAATTGTTTATTTATGACAATAACTTATTGGTTACCTTTTTAGTTTGACAAACACATCAAGTTTCACAACTAATATGTCATTTACTGTATCCATTTATAATCTGCTTTCAATTAGCCTCCGACTGTAGCTTTTGTAAGCTAAAATCAAATCTGTATTGAACATGTTAAATTATGTTTTTTGCCATTATATAATTTAGGTTAATAGTTAAAATGGTTTGGCTTAGATTTTTACTATGGTAACAACCCTGTTAGACTTTAAACATTGTCAACTGTTTGATCATATATTGGATAGTCCAGATCAAAGTATCCACTAACAGATTTTGTAATCCTGATTCACGAACGATCATAAATGTCCAATAGATAATTGTATGATTGATAATATCAAGCGTTTTCCTACTAATTGTGTGTTGTATCTTATTTTTGGCTCAGTTTGGGTCATACACCTATGATTTTTATACCATATTAGATGATCAAAATCTGAATAGCTTTTAATAAATTATTTTTAAGTAGAAACTGCACTACCATTTTTGATCAATAAGCCTTAACTATTACAAGAGATGGCTAGAGCTATGTTGGATGTTTTAAACTGTGAAAGTACCCCTTTTTTGTGGGCTTGGTCAGTCCACCATGGAGCTAGGACTAGGAGCTATTAGCGATTATTGTATATTCATTTTACGCTTGGGAAAAGGCAACTTTGAGACCTCAATCATATCAATAAATCATGCATGGCCTTCAAGCTAAGGCTTATTGGAAAAATTACCCTTTAATCATGCAATATTTCTATCATAGTTATCTATCTATATTAGCACTCTGATACGTACTATGCGGGTATGTGTTTTATATGTGTGATACTTTTGTGTTTAAATGAAAGCTGAAATCCAAGATAAAGTGAAAATAAATTCCTCTAGCATGGCAATGACGAAGATATAGGTACACTGGCATGGGATGGAAAAATTGAATTAGAACTTTTGTTTTTCAACAGTATTATGATAGTGATTAGTGCAGCAGGAAAAAGTGGTAGGCCATTGTTAAAATGTGGGGTCAAAATGTTCGGTCAATCCCCATCGAACGAAAATCACACTACGTATGGTGACTCCATACCGAAAAACACATTCAAATTTGATGACACTCTACCGAAAACCTCATCATAGCCACAAGTGGAGCACCGAGTCTATTTAACAATGTCCAAGTGGTATCATAGTAGAGATATAGAAGAAACACAACTCATCTATTATACCATTCAATAACATATCAAACAGAAGCTCCTACTCTGATTTGATTTTAACTGGAATAAGGATCATTTTCCAAATTTATGAAGCTGAATTCATGAAATCAAATTGTTCTGTTACATCCATGATAACCATTTGAACAAAGTTAGCGGTTTGTATCTCAAGGAATTTCTCGCTAATGCTTATAATTAATAGCGAAAATTTGGTTCAATGCCTTATTTTTAGAATTGATACATGAAAAACTCTTTTCAAAAACATGTTTTAAATTGCATTTCTATTTTTTATTTTGATAATAAAATAATTTGTTTTTTTGTTGGAAATTAAATCTGAATACTAATCGTATGCTTTTATTATGCAATTTTATTTTATTCTGAAAATCTGCAAATGCAGAGGGATCTACAAATATTTGCAGCGTGGAAACTTCAAATATTTGCAGATTTCTATGCACAGAGTTTTTCACTAAATATCTTGAAATTTAAAAATAGTGGGTTATTTTCATGATATGTTTTTGAAAGGGGACGACCGTGTATTTTGAAAGTGGAAAGCGGTGTTTTTACAAATCTTCCCTAATTAATAACCATGTTAACCTTATACATGCTATTCCTGAAGTCTGAATTACTAGTATTTTCTGATAAAAGCTCCAATGTTAAGATGATAATCTTTATTCTTCACTGTTATATTTTGATACGCAGCAAACAAACACAGCGGACATGTTAGATTTAGCCGTAGACTACATCAAGGAACTTCAAAAACAAGTCAGGGTGAGCACCAATGCACATTTTCCATGTGTTTACTTATTTCAGTTCATAATAACACAAACATTTTCCACTTAATGCAGACAATTTCAGATAGTCGAGCGAATTGCACATGCTTTAGCAACGAGCAAAAGCCATACACTCACCCTGCGGAATAAGTTTTCTATAGATTAGAAAACTATAGAAACTCCATAAGATAATTCTCCTTGCTGAACAGTAATATTGTTCTCAATCTGCATCAGTGGAGACTTATATACTAGACAGTTATGTAGTGCTATTAAGATCACCATGTACATATTTATCTTCTTTCTATCAATTTATATATTAGAGAGGTCATCAGCAAGTTACAATTACTGCTATATATATTGTTTCTTTGTTACATGCAATTGCGAATTTGCAGCATGCGAATGTATAATAAACCTCTGCATTTCCAAGACATTGGATTCAGTATTGTATTTTCAGTTAAACTGATCTTTGTTTGTTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020691604.1	2.5e-64	transcription factor bHLH130
Swissprot	Q66GR3.1	1.6e-55	bHLH transcription factor bHLH130
trEMBL	A0A2I0VYP8	1.8e-64	Transcription factor bHLH130

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G42280.1	45.95	3e-63	238	AKS3;FBH4	basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G00629	AT2G42280.1	346	108	14	16	282	12	357	45.95	3e-63	238
AfisC7G00629	AT1G05805.1	345	140	13	16	281	18	360	35.94	2e-40	162
AfisC7G00629	AT1G51140.1	102	26	1	177	278	279	378	72.55	3e-39	158

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	216	261	38.2	9.4e-10

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001046	F	core promoter sequence-specific DNA binding
GO:0001228	F	transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0006366	P	transcription from RNA polymerase II promoter
GO:0005829	C	cytosol
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009637	P	response to blue light
GO:0009739	P	response to gibberellin
GO:0009911	P	positive regulation of flower development
GO:0010119	P	regulation of stomatal movement
GO:0042335	P	cuticle development
GO:0048573	P	photoperiodism, flowering
GO:0048767	P	root hair elongation
GO:2000488	P	positive regulation of brassinosteroid biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network