result

Gene information

Detail information of AfisC7G00842

Location

Gene	Chr	Start	End	Strand
AfisC7G00842	chr7	173685279	173690671	+

Sequences

CDS

>AfisC7G00842
ATGGGTAACCTCGTCTCTAATCAGGCTCAACCACAGTCTCCACCTCAGCCTACCTCAAGAGAAATTTCACCTATTACCAAACAGGAATGCAATCGGCAAATTCTACTGAACAATACTCCACCGCCCCCCAATCAGAATCTGCCACGCACCCGCGTCCTTCACCACCAGCTCTCCGATATCCGCTCCGCCTACACCTTCCTCCGCCGCCTCGGCCGCGGCCAGTTCGGCATAACCTACTTAGTCCAGCACAACACCACCAATCAGCTCTTCGCCTGCAAAACCATCCCCCAGCGCGGCCTTCTCTCCAAAAGATCTATGCAGGACGTGCGTCGCGAGGTTCAGATGATGCACCATTTGACTGGACACGAGAACATCGTGGAGCTGAAGGAGTTGTACGAGGACAAGAGTGCGGTTTACATTGTGATGGAGTTTTGCGAAGGCGGGGAGCTTTTTGAAGGTATTGTTAAAAGAGGGTTTTATTCGGAGAAGTGTGCGGCGAAGATTTTCAGGCAGGTGATGAAGGTGGTGTGCGATTGTCATTGTTTGGGTGTCATGCATCGGGATTTGAAGCCTGAGAATTTTTTGTTTTCAACTGCGGATGAGTCTTCGGTTTTGAAAGCTATTGATTTTGGATTGTCCACTTTCTTTAAACCTGGAGATGTATTTGATGAGCTTGTTGGTAGTGCATACTACGTTGCACCTGAAGTACTTAAAAAACAGTATGGACCTAAGGCTGATATTTGGAGTGCTGGGGTGATACTGTACATTCTTCTGACTGGTGTACCTCCATTTTCAGCAGGTAGTGAAAAAGAAACATTTGCAGCTATATTGCAAGGAGATATTGATTACTCATCCGAACCTTGGCCCTCAATATCAAGCAGTGCAAAAGATTTGGTCAAGAAAATGCTGCAGACAGATCCCAAGCAGCGTCCTTCTGCGGATGAAATCTTGAAACATCCATGGCTAATAGTTGGCGGGGATGCGTCCGATAAACCAATGAATGTCACAGTTTTATTAAGAATGAAACGATTCACAGCAATGAACAAGCTTAAAAAGGTAGCACTGAAGGTGGTTGCGGAAAATCTATCAAAAGAAGAAATCATTGGTCTGAAAGAAATATTCAAATCTATGGACGTTGATAAGAGCGGTACGATAACTTTTGATGAATTAAAAGCCGGTTTGTATAAATGGGGCACCAAGCTGTCTGATACTGAAGTGAGACAATTGTTGGAGTCGGCTGATGTAGATGGCAACGGTATCCTCGATTATATGGAGTTCATAACAGCCACAATGCATATAAATAGAATGGAAAAGGATAATCGTTTATGCAAAGCATTCTTGTATTTTGATCAGGACAACAGTGGATACATCACGATGGACGAGTTGAAGCATGCCCTTGAGAAACATAATACCACTGACGAACAAAAAATAAAGGAGATTCTTTCAGAAGTGGATGCCGACTCTGATGGAAAAATTAACTATGAGGAGTTTGTGGCCATGATGAGAAGTAACAACCACGATTATACTGGAAACCATCAACTTTAA

Protein

Gene

>AfisC7G00842
GGAAAACATCCTCTTGCGCTCCAAATTCAATCATCACTGCTTCAACCCTACTTCTCAACGAACTTCTACCAAATCCACTTTCTCCTTCTCCTTCCTTTCAAAGAAAAATGGGTAACCTCGTCTCTAATCAGGCTCAACCACAGTCTCCACCTCAGCCTACCTCAAGAGAAATTTCACCTATTACCAAACAGGAATGCAATCGGCAAATTCTACTGAACAATACTCCACCGCCCCCCAATCAGAATCTGCCACGCACCCGCGTCCTTCACCACCAGCTCTCCGATATCCGCTCCGCCTACACCTTCCTCCGCCGCCTCGGCCGCGGCCAGTTCGGCATAACCTACTTAGTCCAGCACAACACCACCAATCAGCTCTTCGCCTGCAAAACCATCCCCCAGCGCGGCCTTCTCTCCAAAAGATCTATGCAGGACGTGCGTCGCGAGGTTCAGATGATGCACCATTTGACTGGACACGAGAACATCGTGGAGCTGAAGGAGTTGTACGAGGACAAGAGTGCGGTTTACATTGTGATGGAGTTTTGCGAAGGCGGGGAGCTTTTTGAAGGTATTGTTAAAAGAGGGTTTTATTCGGAGAAGTGTGCGGCGAAGATTTTCAGGCAGGTGATGAAGGTGGTGTGCGATTGTCATTGTTTGGGTGTCATGCATCGGGATTTGAAGCCTGAGAATTTTTTGTTTTCAACTGCGGATGAGTCTTCGGTTTTGAAAGCTATTGATTTTGGATTGTCCACTTTCTTTAAACCTGGTACGCAGATTATTTTTGAATCAATAATTTTGACTTTTGAGAACAATATGTACTAATGTTACCTTGAATCCAGTTACTGTTATTCTTGAAGATTGCTATCTGCAGTATCAACTCATCTATTACGATTTGTTGAAAATGTTCTTGATTATATTCCTTCTATTGATTTTGTAACAAGCAAAAACAGGCAACTGAAATAATTGCTTTCTATGTTCGATATGCTAAACTACTCTAACATAATTTATTTGTCATCACTGCAAGTGATTAGAAGACAGGAATCGTAGATTGACAATCTTGTGAGGTTTTGAATAACATGAAAACTTCAGTGTGTCGCAACTTATTCAAGTTGCAGGCCTTTTGCCGACCATTAAAGTTATATTGTTAAGCATAATGAATTTGAAGCCAAAAATAATCACAGGTTGCCACAAGAATAGTAGCCGCTTCTCACAATGTTGATTTCATAACATCTACTTTGCCCAGAACTAATGATTGTCGTTTTGTTTAGGCAATGGAGTTATTGGTACATACACGAGCTTACTAATTTTCCATTAAGAATGAGTAAAATAATTTGCAAACGAGATAGAATAGAACATTGTTTGGCAGAGATTAATAAATTCAATATTCTAGTCTATATATGTAACCAACTTTCCAAGTATAGTTTTCTTGAATTAGTCTCAAGATGAACAAATCAATCTTGTAGCAATTAATTTTCATTCTTCCTATCATATTACTTTTATACATCAAGGTTAAGAACTATTTTTATCTTACCATCTTTTACTTCTTTGTGTAAAGTTCTTCATACCATAATGTCAACTTGATGAACATTGGCTGTTGTGCAGGAGATGTATTTGATGAGCTTGTTGGTAGTGCATACTACGTTGCACCTGAAGTACTTAAAAAACAGTATGGACCTAAGGCTGATATTTGGAGTGCTGGGGTGATACTGTACATTCTTCTGACTGGTGTACCTCCATTTTCAGCAGGTTCTGTAATTGCAAACTTTCATATCATTGAAAGACCGTATGCTGGCATTTGCAAAAAATATAATATTTAAGTGGTTGCATATTTGCAGGTAGTGAAAAAGAAACATTTGCAGCTATATTGCAAGGAGATATTGATTACTCATCCGAACCTTGGCCCTCAATATCAAGCAGTGCAAAAGATTTGGTCAAGAAAATGCTGCAGACAGATCCCAAGCAGCGTCCTTCTGCGGATGAAATCTTGAGTAAGATCAAAGTCTTATGCTGCATTACACATTTGATTTCTGTAATTAAGTATTTTGGTCAGCTTCTGTTATTTTCCATAGTTTATTATCAATATTCGATGTATCTGGCCATGCCCCTTACAAATATGCACATTTTCACTGTGAATTTGGCAAATGGTTATATGCAGGAAGCCTCTTCTTTCTTGTTCACCGGTTTGTTGTACAAACACATTATCAGCTAGTGTTGCACTCTTATCTTCACTAATCTTTTGAAAAGTAGCACCATTAACCAACTCAGCTGACATTATCTGTATTCATATTCATGCTCAGCTCAATCTTTTCATCTGTTTTAATAATTTCAGAACATCCATGGCTAATAGTTGGCGGGGATGCGTCCGATAAACCAATGAATGTCACAGTTTTATTAAGAATGAAACGATTCACAGCAATGAACAAGCTTAAAAAGGTAGCACTGAAGGTGAGCAAATATATATATATTGATTTTAATTGAGCTCTTCTATCTGAACTGATAAAGTTAAACATACTTCAACAATTGTGATGCAGTGTGTGTGAAGTTCTAGAGTTCTTATGTTGTAATAATATGCCTCTCCAGGTGGTTGCGGAAAATCTATCAAAAGAAGAAATCATTGGTCTGAAAGAAATATTCAAATCTATGGACGTTGATAAGAGCGGTACGATAACTTTTGATGAATTAAAAGCCGGTTTGTATAAATGGGGCACCAAGCTGTCTGATACTGAAGTGAGACAATTGTTGGAGTCGGTATGATTTCTTTATTCTCCAGAGTAGCACTGAATTCAATTTTCTATATTTATATTATGCATTTTGAGAAAAATATTTTTTGCTTGCCTATTTACTGATATTCAGCTTATATGCCCTTTCTTCTTATTATTATAGTGGGTAAATTCACAAATGCAGCGAAGACTTTGCTTTGCGGAAGCTTTTCCCAATAGATTTTTTATGATCCAAATCACAAAGAAATAAATTTGGATAGAAAATAAACGGACATGAAATCAAAAAACAATACTCAACAGATTCCATCCAACCATCATGTTTATTGATTCACCAAAATTTGTTTACAATTAATCGAACAAAATATGAATTAAACCAATAACCAAATTGAGAAAGGGAGTCTTGATCTCTATGTCTAAAATTGTTGGAGGAGAAAAAAAAAATGGAAGAAGAGAGAATTAGCAAGTAGATTTTCACACATTTTACACACTCTCTTCTAGGCTCTATTTATAACATCAATTATTTAATGTCCAAATTAATATTAGATGACAAAAAATAAATTGATTAGCTAATTAGAGAGATAATAAATATAACAAAATATGTCTATTGATTAGGGAAAACAAAATTTTATTTTTCTTCCTTTTTGCATATTTGTTTCCTTTTAGTTGAGATTTTGTATCACCAAAATTTAACAACAACATCTATAATGATTTCTTCATGCAAATTAATGTCATAGAACAGGATCTTAAGCAGATTAACTGTACACTGTCTTATTTCAATTATTGGAGAGCTGTTTCTGAAACTTGGTCATTAAACCAAACACCCATAAAAATTGAATTCGACAATACGTGAATAAAGTTCACAGTAGGTTTACATATTTAAAGCATACTGTGCTGCATATAATATAATTTTATGATCTGCCCATAAAGTGAAGCGTCCAATTGATCAATGTAGATTAAACATCAAATACCAAGTCAAATTTTATGGCGTTAGTTGTGCTACTTCTCTAGAAAGCTATAAATGCAATCGTGAGTAGCCTCTAAATTAACCAACCTTAAACTAATACAATGTTATATAGGTGTGATGGGCTGTAAGCTATGCTGCCTGTTAGTTTGTCACTCACTCTTATCACACTCACAATAAGAGTTCCCTACATACTTTCAACGTATGACGATACTTTGTAAACTCAAATGCATCTTAACCTGCGATGATGTTCTTCTGGGGCTGTAATCCCAGTCACATGCATTAACATGTAAACTGAAGCTCATCCTATATTATTTTGATTATTTGTCTTCAAAATATAAAACATTGTTTGCTGCAGGCTGATGTAGATGGCAACGGTATCCTCGATTATATGGAGTTCATAACAGCCACAATGCATATAAATAGAATGGAAAAGGATAATCGTTTATGCAAAGCATTCTTGTATTTTGATCAGGACAACAGTGGATACATCACGATGGACGAGTTGAAGCATGCCCTTGAGAAACATAATACCACTGACGAACAAAAAATAAAGGAGATTCTTTCAGAAGTGGATGCCGACTCTGTAAGTTATACATCTGCTCCTTTATTCATATATTTGATATTACCTTTATACATCGTTATCATTCTTTATATATGCATGTATCGTATCTGTTAGGACTGTTATGATAATGGTAACCGTTATCCTACCGATACTATTGAAGATAAAAAATGACCACCGATACTTACCGTTACTGCTAGTAAAATGGCCGTTGATCGATAATGGTAAATTTACCAATACATAAAAATATTAAAATTTTATTACATTAAAATTTAGATTGTGATAAACAAAAGTATATTTTGTTACCGATTCTAATTCCATTAATCCCTATCCCAACATTTTGACTTGTTTTACATGGTATAGAAAATATTCTTGGTTCATCAACAAATATTTATAACGACGTGAAATAATAACTTTGTTAATCATGGACTTTAAAACCATAAAAGAAACATCATCATAAATAATACTGCAAATGTTTTCTTAAAATCAAATATACCTTCAAAAGTGTTCGCGGTTAGGATTAATTAACATAGTGAAAAAACAAAATTAATACGATTGGTAAATTTACCGTTACAACTGGTTTTGACATTTCTTTACCACTGCATTTACCGTTAACAATGGTAAATTTTCATTAGCATATCGAAAGCATTGTTATACCGATGTAGCTCAATATCGATTATCAATTGCTTTGTATTGGTATGGTAATGACAAATTTACAATTACGATAACAACCTTAATATCTATTTTATACTTGTGCAAGAGTATAGGGTTTTAGACCTGTAATATGTTAATGTTTCATATCTGAGCAAGAGTAGTATATTTCTCAAGTTAGTTGCTGCATCTATTCTTTAACAGCATATTAACTAACCAAATATTCATCTTATAGGATGGAAAAATTAACTATGAGGAGTTTGTGGCCATGATGAGAAGTAACAACCACGATTATACTGGAAACCATCAACTTTAAACATCTTTTACAGTTCATATCATTAACTTCTCATACTTGGGGTGCTGCAAAGAACATCGAACTCTATCGGTAAGGAATACCTAAAATCGATCATGGACGAAGGAGATGGTTTTTACCTTCCAAAAGGTCAATGTATGTTTTTTGGTGGTGATACATTGTTTTATCCTTGTATGACTAGTAAATGTTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020673496.1	1.9e-179	calcium-dependent protein kinase 1
Swissprot	Q42479.1	2.7e-170	Calcium-dependent protein kinase isoform CDPK6
trEMBL	A0A8T3BHT2	1.2e-178	Calcium-dependent protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G23650.1	61.77	6e-178	620	CDPK6;CPK3	calcium-dependent protein kinase 6

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G00842	AT4G23650.1	463	177	51	513	65	527	61.77	6e-178	620
AfisC7G00842	AT5G12180.1	469	191	39	507	48	516	59.28	4e-172	601
AfisC7G00842	AT5G19360.1	469	193	39	507	43	511	58.85	2e-170	595

Ortholog group

Species	Genes
Allium cepa	g406669.t1
Allium fistulosum	AfisC7G00842
Allium sativum	Asa3G04227.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	64	322	252.3	4.3e-75
PF13499.3	EF-hand_7	Domain	370	430	37.2	2.6e-09
PF13499.3	EF-hand_7	Domain	440	502	51.8	7.4e-14

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005509	F	calcium ion binding
GO:0005773	C	vacuole
GO:0005829	C	cytosol
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009651	P	response to salt stress
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009931	F	calcium-dependent protein serine/threonine kinase activity
GO:0010119	P	regulation of stomatal movement
GO:0010359	P	regulation of anion channel activity
GO:0018105	P	peptidyl-serine phosphorylation
GO:0046686	P	response to cadmium ion
GO:0019903	F	protein phosphatase binding
GO:0046777	P	protein autophosphorylation
GO:0080092	P	regulation of pollen tube growth

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13412	CPK; calcium-dependent protein kinase	EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network