result

Gene information

Detail information of AfisC7G00889

Location

Gene	Chr	Start	End	Strand
AfisC7G00889	chr7	182363428	182365462	-

Sequences

CDS

>AfisC7G00889
ATGGCAAATTCTGAAAATTCAGAAGAATCCCGGGACCCTAATTCCCCAATCCGCAACCTTCTCTTCGACAAGTACGAAATGGGCAGACTCCTCGGAAAAGGCACCTTCGCCAAAGTCTACTACGCACGCGACCTAACCACAAACAACCCCGTCGCCATCAAAATCATAAACAAAGAACAAGCCAAACGCCACCATCCTCAGATCATCAACCAAATCACCAACGAGATCTCCGTCATGAGACTCGTCCGGCACCCCAACATAGTCGACCTCAAAGAGGTCCTCGCCACCAAAACCAAGATCTTCATCATCGTCGAGTACGTCCGCGGCGGCGAGCTCTTCGCACGCGTCGCGCGCGGCAAGCTCTCCGAGAAGGAAGTGAGGAAATACTTCCAACAGTTGATCTCGGCCGTCGATTTCTGTCACTCCAGAGGCGTGTACCATCGGGATCTGAAACCGGAAAATCTGCTTCTGGACGAGAACGGAGATCTGAAAATTTCGGATTTCGGATTATCCGCTTTGCCGGACCAGCTGAAGAACGATGGACTTCTGCATACGCAGTGCGGGACCCCTGCTTACGTGGCTCCCGAAGTTTTGCGGAAGAAAGGGTACGATGGTTCTAAAGCGGATGTGTGGTCTTGTGGGGTGATTCTGTACGTTTTACTCGCTGGATTTCTACCGTTTCAGGATGAATGCTTGATGAAGATGTATACCAAAGTTTTCAAAGCTGATTTTCAAATTCCGCCATGGTTTTCTCCCGACGTTAAAAGGTTAATTAACAGGTTGTTGGTTGCTGATCCTGAGAAGAGAATTTCGATTTCGGAGATAATGGAAGTCCCATGGTTTAAAAGAGGGTTCATCGGAGCTAGTGGATTTTACATTTCGGACAATGACAAGGGAATCAACTTCGATTTGGAAGAGGTAGATTCTCCGAGATTTTACAACGCGTTTGAGTTGATTTCGAATTTCTCTTCCGGTTTTGATTTGACGAGTTTGTTTGAGAGTAGGAAGAAAAAGGGGACGGTTTTCACGTGTAGGAAGTCAGTGGAGAAGGTGATCGATGCGATAGAGAAAGTAGGGAAAGGGTTGGGGTACTGCGTGCAGAAAGGGAAGAGTTGTAAGGTGAGGTTGGAAGGGAAGAGGGAAGGGCGAAAAGGTAAATTGGCGGTGACGGCGGAGGTGTTTGAGGTGGCGGATGAGGTGGCCGTGGTTGAGTTCTGTAAGAGTTCCGGTGATACTTTGGAATATGTGAAGTTTTGTGAGGAAGACGTAAGGCCTGGATTGAAGGATATAGTTTGGACATGGCAAGGTGATGATGAGCAAAGGCAGAGTGAATGTTGA

Protein

Gene

>AfisC7G00889
GCCACATGGTTCCACAATAATAGACGCTCTCACCTGACCTGCACCTTATCCTCAATTCTTTAATCAACAACCAACCGAAATATAACAAACAACTCACGCGCCTTGTTTCTTCCAAATACAGCGTGCCGCTTCACTACGTCCAAATTTTTAACCCGTATATAACCAGCCACTACAAACCATTCCATTTAACATACCGGCCTACTACTCGCCAAATCCACAAAAATGGCAAATTCTGAAAATTCAGAAGAATCCCGGGACCCTAATTCCCCAATCCGCAACCTTCTCTTCGACAAGTACGAAATGGGCAGACTCCTCGGAAAAGGCACCTTCGCCAAAGTCTACTACGCACGCGACCTAACCACAAACAACCCCGTCGCCATCAAAATCATAAACAAAGAACAAGCCAAACGCCACCATCCTCAGATCATCAACCAAATCACCAACGAGATCTCCGTCATGAGACTCGTCCGGCACCCCAACATAGTCGACCTCAAAGAGGTCCTCGCCACCAAAACCAAGATCTTCATCATCGTCGAGTACGTCCGCGGCGGCGAGCTCTTCGCACGCGTCGCGCGCGGCAAGCTCTCCGAGAAGGAAGTGAGGAAATACTTCCAACAGTTGATCTCGGCCGTCGATTTCTGTCACTCCAGAGGCGTGTACCATCGGGATCTGAAACCGGAAAATCTGCTTCTGGACGAGAACGGAGATCTGAAAATTTCGGATTTCGGATTATCCGCTTTGCCGGACCAGCTGAAGAACGATGGACTTCTGCATACGCAGTGCGGGACCCCTGCTTACGTGGCTCCCGAAGTTTTGCGGAAGAAAGGGTACGATGGTTCTAAAGCGGATGTGTGGTCTTGTGGGGTGATTCTGTACGTTTTACTCGCTGGATTTCTACCGTTTCAGGATGAATGCTTGATGAAGATGTATACCAAAGTTTTCAAAGCTGATTTTCAAATTCCGCCATGGTTTTCTCCCGACGTTAAAAGGTTAATTAACAGGTTGTTGGTTGCTGATCCTGAGAAGAGAATTTCGATTTCGGAGATAATGGAAGTCCCATGGTTTAAAAGAGGGTTCATCGGAGCTAGTGGATTTTACATTTCGGACAATGACAAGGGAATCAACTTCGATTTGGAAGAGGTAGATTCTCCGAGATTTTACAACGCGTTTGAGTTGATTTCGAATTTCTCTTCCGGTTTTGATTTGACGAGTTTGTTTGAGAGTAGGAAGAAAAAGGGGACGGTTTTCACGTGTAGGAAGTCAGTGGAGAAGGTGATCGATGCGATAGAGAAAGTAGGGAAAGGGTTGGGGTACTGCGTGCAGAAAGGGAAGAGTTGTAAGGTGAGGTTGGAAGGGAAGAGGGAAGGGCGAAAAGGTAAATTGGCGGTGACGGCGGAGGTGTTTGAGGTGGCGGATGAGGTGGCCGTGGTTGAGTTCTGTAAGAGTTCCGGTGATACTTTGGAATATGTGAAGTTTTGTGAGGAAGACGTAAGGCCTGGATTGAAGGATATAGTTTGGACATGGCAAGGTGATGATGAGCAAAGGCAGAGTGAATGTTGATTCAGTGTTATTTTTGTACGCTAGTGGATTAGTTGTAGTTTTCGACTTTTCTGTGATTGATGATTTAGCGTGTACATAATACTACTATATATGAGAATTTATTTTTGAAAGTTATGGGTTTGGGTGTATGATTTTGCAGCAAAGTATTTGTTTACAAGCATCTCATATCAGATTGGAATGTAAGATTACGAGTCAAGTTGGTCACACTGACTTAGTAGTGTTTCTATTTGCATGGTTGAGTGAGGCGTATTTGCATGGTTCAAGGGGATGTAAGCTTCCGAACGAGGGAATATTGATCTTCCTGAACGATGAAATATAATCAATTGTCTTGTGCAATTGAGCATTGCTTTGCGTTCTAATAAACGGTACAAGGTATTGAATGCGATCTTTCACGCAAAGAAAATAATGCACGAAAGAAGAATGTATTCTTATGTATGAAAATGACATGTTTTAACTGTTTTGTTATAAATAATTA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010942100.1	2.6e-161	CBL-interacting serine/threonine-protein kinase 5
Swissprot	Q8W1D5.1	1.5e-145	SOS2-like protein kinase PKS25
trEMBL	A0A6I9SFA5	1.9e-161	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G10930.1	62.95	3e-164	575	CIPK5;SnRK3.24	CBL-interacting protein kinase 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G00889	AT5G25110.1	437	133	3	20	438	38	466	63.62	1e-164	575
AfisC7G00889	AT5G10930.1	440	149	3	18	444	5	443	62.95	3e-164	575
AfisC7G00889	AT2G25090.1	442	168	6	19	440	9	449	57.24	2e-145	512

Ortholog group

Species	Genes
Allium cepa
Allium fistulosum	AfisC7G00889
Allium sativum	Asa3G04199.1
Arabidopsis thaliana	AT5G10930.1; AT5G25110.1
Oryza sativa	LOC_Os09g25090.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	25	281	254.7	8.2e-76
PF03822.11	NAF	Domain	310	368	56.4	2.2e-15

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005986	P	sucrose biosynthetic process
GO:0006814	P	sodium ion transport
GO:0006979	P	response to oxidative stress
GO:0007275	P	multicellular organism development
GO:0009414	P	response to water deprivation
GO:0009507	C	chloroplast
GO:0009737	P	response to abscisic acid
GO:0010325	P	raffinose family oligosaccharide biosynthetic process
GO:0010540	P	basipetal auxin transport
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0019593	P	mannitol biosynthetic process
GO:0042538	P	hyperosmotic salinity response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K07198	PRKAA, AMPK; 5'-AMP-activated protein kinase, catalytic alpha subunit	EC:2.7.11.11	Apelin signaling pathway	ko04371
			FoxO signaling pathway	ko04068
			PI3K-Akt signaling pathway	ko04151
			AMPK signaling pathway	ko04152
			mTOR signaling pathway	ko04150
			Autophagy - animal	ko04140
			Tight junction	ko04530
			Insulin signaling pathway	ko04910
			Glucagon signaling pathway	ko04922
			Adipocytokine signaling pathway	ko04920
			Oxytocin signaling pathway	ko04921
			Axon regeneration	ko04361
			Longevity regulating pathway	ko04211
			Longevity regulating pathway - multiple species	ko04213
			Circadian rhythm	ko04710
			Thermogenesis	ko04714
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Bacterial secretion system	ko03070
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Biofilm formation - Pseudomonas aeruginosa	ko02025

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network