Detail information of AfisC7G00968


Location
GeneChrStartEndStrand
AfisC7G00968chr7194586424194590915-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrQDF82431.14.4e-144transcription factor bHLH13-like isoform X1
SwissprotA0A3Q7ELQ2.11.4e-123bHLH transcription factor bHLH113
trEMBLA0A7M3UQL36.1e-172BHLH transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G46510.142.659e-106 380AIB;ATAIB;JAM1ABA-inducible BHLH-type transcription factor

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag540649.t1
Allium fistulosumAfisC7G00968
Allium sativumAsa3G04152.1
Arabidopsis thalianaAT1G01260.1; AT1G01260.2; AT1G01260.3; AT2G46510.1
Oryza sativaLOC_Os01g13460.1; LOC_Os01g50940.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF14215.3bHLH-MYC_NFamily54236166.27.5e-49
PF00010.23HLHDomain35840440.81.4e-10

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0006355Pregulation of transcription, DNA-templated
GO:0009651Presponse to salt stress
GO:0010444Pguard mother cell differentiation
GO:0010629Pnegative regulation of gene expression
GO:0044212Ftranscription regulatory region DNA binding
GO:0050826Presponse to freezing
GO:0043167Fion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13422MYC2; transcription factor MYC2EC:- MAPK signaling pathway - plantko04016
Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.