result

Gene information

Detail information of AfisC7G01146

Location

Gene	Chr	Start	End	Strand
AfisC7G01146	chr7	225182727	225184133	-

Sequences

CDS

>AfisC7G01146
ATGGATAACAACCTCAACCTCGAAGAACTCACCGCCATCCGCGTCCTCGGCCGCGGCGCCATGGGCACCGTCTTCCTCGTCACCATCACAGCCTCATCCTCCTCCTCCTTACTTTCCCCTCCTTTCGCCTTAAAGGTCATCCATAAATCCTCCACTACCCCAAAACAAGATTCGCTCAAACGAGCTCACTGGGAGCTCTCCGTCCTCTCCAACCTCTCCGCCCAAAACCCCTTCCTCCCCACTCTCCTAGGCTCCGTCGAAACCCCCTCCTTCCTCGCCTACGCTTTCCCTTTTTGCTCCGGAGGCGATCTTAACACCCTCCGCTACTCCCTTTCAGATCGCGTTTTTTCTTCATCCGCCATTCGCTTCTACCTCTCCGAACTTCTCATGGCTTTATCTCACCTGCATTCGCTAGACATTGTCTACCGCGATTTAAAACCCGAAAATGTCCTAATCAAAAGCAATGGCCACATCGTTCTAACTGATTTCGATCTCTCTAAAAAATTACAGCATCAAAAACTTACTCACTTTGCCAAATCGCCTCCGCCTGCTGCGAGATCCGCGTCCATCGGTGCAGCAAAAAAGAATTTTAAATTTTTAACCAGGGCAAAGTCTGCGAGGGTCTCACCTGTAAGTAGACGCAGCGCTAAAACGTGCGGTAATGGGTTTGAGAGGTCGAATTCGTTTGTGGGGACGGAGGAGTACGTGGCGCCGGAGATAATCAAAGGAGATGGACACGATTTCGCGGTTGATTTTTGGGCGTTGGGGATTTTGACGTATGAGATGGCGTACGGGAAAACTCCGTTCAAGGGGAGAGATCGGAAGGAGACGTTCAGGAATGTGATTATGAAGGAGGTGGAGTTCGTCGGACGGTCGGGATCGGATTTGACGGATCTGATAGGGCGGCTGCTGGAGAAGGATCCGGAGCGGAGATTGGGGAGCAATGGAGGCGTAGAGGAGGTGAAGGAGCACGTGTTTTTTAAGGGAGTGAAGTGGGGTATGATCACCGAGATGGTGAGCAGACCGCCGTTTTTTTCTGCAGATGTGGATGAGGCGATGAGGATAGCGGGAGGTGAGTGGAATGAGGGGTTTGACGTTAGGGAATATTTTGAGAATGGACGGAGGGAGAAGACAGCGCCGTTAGATATGGAGCTGGACGTGGAGGAGTTTTAA

Protein

Gene

>AfisC7G01146
ATCTACCTCTCTTATAAATAGTCCCACGTCCCCAGGCAAAAGAAAAAACAAACCAAAATGGATAACAACCTCAACCTCGAAGAACTCACCGCCATCCGCGTCCTCGGCCGCGGCGCCATGGGCACCGTCTTCCTCGTCACCATCACAGCCTCATCCTCCTCCTCCTTACTTTCCCCTCCTTTCGCCTTAAAGGTCATCCATAAATCCTCCACTACCCCAAAACAAGATTCGCTCAAACGAGCTCACTGGGAGCTCTCCGTCCTCTCCAACCTCTCCGCCCAAAACCCCTTCCTCCCCACTCTCCTAGGCTCCGTCGAAACCCCCTCCTTCCTCGCCTACGCTTTCCCTTTTTGCTCCGGAGGCGATCTTAACACCCTCCGCTACTCCCTTTCAGATCGCGTTTTTTCTTCATCCGCCATTCGCTTCTACCTCTCCGAACTTCTCATGGCTTTATCTCACCTGCATTCGCTAGACATTGTCTACCGCGATTTAAAACCCGAAAATGTCCTAATCAAAAGCAATGGCCACATCGTTCTAACTGATTTCGATCTCTCTAAAAAATTACAGCATCAAAAACTTACTCACTTTGCCAAATCGCCTCCGCCTGCTGCGAGATCCGCGTCCATCGGTGCAGCAAAAAAGAATTTTAAATTTTTAACCAGGGCAAAGTCTGCGAGGGTCTCACCTGTAAGTAGACGCAGCGCTAAAACGTGCGGTAATGGGTTTGAGAGGTCGAATTCGTTTGTGGGGACGGAGGAGTACGTGGCGCCGGAGATAATCAAAGGAGATGGACACGATTTCGCGGTTGATTTTTGGGCGTTGGGGATTTTGACGTATGAGATGGCGTACGGGAAAACTCCGTTCAAGGGGAGAGATCGGAAGGAGACGTTCAGGAATGTGATTATGAAGGAGGTGGAGTTCGTCGGACGGTCGGGATCGGATTTGACGGATCTGATAGGGCGGCTGCTGGAGAAGGATCCGGAGCGGAGATTGGGGAGCAATGGAGGCGTAGAGGAGGTGAAGGAGCACGTGTTTTTTAAGGGAGTGAAGTGGGGTATGATCACCGAGATGGTGAGCAGACCGCCGTTTTTTTCTGCAGATGTGGATGAGGCGATGAGGATAGCGGGAGGTGAGTGGAATGAGGGGTTTGACGTTAGGGAATATTTTGAGAATGGACGGAGGGAGAAGACAGCGCCGTTAGATATGGAGCTGGACGTGGAGGAGTTTTAACGGAGGCGTTAGAGGTAATCCTAAGCGAGTTTGTGTATAGAGAGCGGGAGAAGCGAAGAGTATGATAGTGTAATTAGGGCAATAAAGTTTAGATTTAGAGTCAGATTTAACTTGCAATTGGTTTTGCACTAGTGACGTGTAAAATATTTTTTCCGATAAGTGAAATGTTGATCGAAG

Functional annotation

Database	accession number	e-value	annotation
nr	KAF3331102.1	9.2e-110	Serine/threonine-protein kinase UCN
Swissprot	Q9LT38.1	2.8e-103	Protein UNICORN-LIKE
trEMBL	A0A833R2R5	6.6e-110	Serine/threonine-protein kinase UCN

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G20830.1	53.40	3e-105	378	AGC2-4;UCNL	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G01146	AT3G20830.1	382	150	9	5	374	16	381	53.40	3e-105	378
AfisC7G01146	AT1G51170.1	396	169	10	4	389	16	397	51.26	3e-104	375
AfisC7G01146	AT3G25250.1	375	177	12	5	366	12	365	43.73	3e-72	269

Ortholog group

Species	Genes
Allium cepa	g158140.t1; g7938.t1
Allium fistulosum	AfisC7G01146
Allium sativum	Asa3G03957.1
Arabidopsis thaliana	AT1G51170.1; AT3G20830.1
Oryza sativa	LOC_Os08g39460.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	12	179	99.8	1.5e-28
PF00069.22	Pkinase	Domain	226	327	71.6	6.1e-20

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000166	F	nucleotide binding
GO:0000904	P	cell morphogenesis involved in differentiation
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005634	C	nucleus
GO:0006979	P	response to oxidative stress
GO:0008134	F	transcription factor binding
GO:0009536	C	plastid
GO:0009611	P	response to wounding
GO:0009630	P	gravitropism
GO:0009733	P	response to auxin
GO:0009826	P	unidimensional cell growth
GO:0009882	F	blue light photoreceptor activity
GO:0009926	P	auxin polar transport
GO:0015969	P	guanosine tetraphosphate metabolic process
GO:0019901	F	protein kinase binding
GO:0034654	P	nucleobase-containing compound biosynthetic process
GO:0036290	P	protein trans-autophosphorylation
GO:0043168	F	anion binding
GO:0043232	C	intracellular non-membrane-bounded organelle
GO:0044446	C	intracellular organelle part
GO:0048366	P	leaf development
GO:0048588	P	developmental cell growth
GO:0051782	P	negative regulation of cell division
GO:0080060	P	integument development
GO:0080147	P	root hair cell development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network