result

Gene information

Detail information of AfisC7G01153

Location

Gene	Chr	Start	End	Strand
AfisC7G01153	chr7	227690488	227693486	-

Sequences

CDS

>AfisC7G01153
ATGGGAGATCCATATACAAATCTTTTCAGAGGCATCTTTAATTATTACCCTAATTTCCAATCAAATAATAACTATTGTTATGATCAATCTCCTCTTCCTTCCTTTAACTACAATATCAATTCTCATTTCCAAACTTCGCCACCTTCACCTCCGTTACGAGAAGCACTTCCTCTACTTGGTACTTTGAATCCATCAAAGGATTTTCAAGAAAATGATAACACTGAAAAAGATAAGTGGGACTTATCTGAAAATAATCAGGAAGATGGTGTGGCAATTGCTCTTCATATTGGACAGCCAAACCCTAGCTATGCAGTTGACCTTATATCTAGGGTTTCTGCTTCTTCCAATAATATGCAAGCAGAAGAGTATTATTATAATACTAATATTAGTAGTAGTATTGCTGCTGAAGATGAAGAAACTACTGAGAGAGATGAAGCTGTGCCTACAACTGCCATAGGAAGATTAAATAAAGGACAATATTGGATCCCAACTCCCTCTCAAATACTTATTGGCCCAACTCAGTTTTCGTGTCCTGTTTGTTGCAAAACTTTCAATAGATATAACAATATGCAGATGCATATGTGGGGGCATGGATCACAATACAGAAAAGGCCCGGAATCACTAAGAGGAATACAGCCAACAGCAATGCTTCGACTTCCATGCTATTGCTGTTCTCCAGGCTGCAGAAACAATATAGATCATCCAAGATCAAAGCCACTGAAGGATTTCAGAACTCTGCAGACTCACTACAAAAGGAAGCATGGCATCAAACCATTCATGTGTAGAAAATGCGGCAAGGCCTTTGCGGTTCGAGGAGACTGGAGAACTCATGAGAAGAATTGTGGCAAGCTTTGGTACTGTATTTGTGGTTCAGATTTCAAGCATAAAAGATCACTTAAAGATCATATTAAAGCATTTGGTCAAGGGCATTCAGCTTATGGGATTAACTGTTTCGATCATGAGGAGGAAGAACCTTCTTCAGAGATTGAACAGGACTGTGATGCATCTCTATGA

Protein

Gene

>AfisC7G01153
TTCATTCTTCCTTTCTCTTTGCTTCATCTCAGAACTTTCCCTTCTTTATTCCTCATATCATCTTCTCACTCTTGCATCTACTGAATAATTTACTCCTTTTCTTTTGCACTTTATAATCTTTTTCTTGTTTCTAGGTTTAGTTCTGGTCCTAATGGGAGATCCATATACAAATCTTTTCAGAGGCATCTTTAATTATTACCCTAATTTCCAATCAAATAATAACTATTGTTATGATCAATCTCCTCTTCCTTCCTTTAACTACAATATCAATTCTCATTTCCAAACTTCGCCACCTTCACCTCCGTTACGAGAAGCACTTCCTCTACTTGGTACTTTGAATCCATCAAAGGATTTTCAAGAAAATGATAACACTGAAAAAGATAAGTGGGACTTATCTGAAAATAATCAGGAAGATGGTGTGGCAATTGCTCTTCATATTGGACAGCCAAACCCTAGCTATGCAGTTGACCTTATATCTAGGGTTTCTGCTTCTTCCAATAATATGCAAGCAGAAGAGTATTATTATAATACTAATATTAGTAGTAGTATTGCTGCTGAAGATGAAGAAACTACTGAGAGAGATGAAGCTGTGCCTACAACTGCCATAGGAAGATTAAATAAAGGACAATATTGGATCCCAACTCCCTCTCAAATACTTATTGGCCCAACTCAGTTTTCGTGTCCTGTTTGTTGCAAAACTTTCAATAGATATAACAATATGCAGGTATTTTTATTTTAGTTCTTGTTGCTGTTATTTTTCTTGTTTTCCAACTGAATTTTTACAGATTCTTTTTAACTGTTGAATTGGATTTGATGCATCAAAGTTTTTAAATTTTATTCTTCAGCTGTATTATTCCTTTTCCTTTTTTCCTTCCACTGCAACTTAACAAAATTGATACTGAATATTTCAATTAGATCAATTTTGTTTTTTTTTCTTTGGCAAGTATGTAAGTTTCCTCTCCCGTTTTTGTTTTATTAAATTCAACATGCAAAAAGCTAAATAGGAGTTGCGACCAAAAGTAACAAAGAAAGATTTTAACCAATTTTGCCATTGCATAATTGGATGCAAATAAGTTTAACCAAGACAGCGAGTAATAAAATGAATTTTTTTTAGCCATATATTTAAGTTAATAATAATTAAAGGCTATTCGTGTCTTATATTGAAGATGTAAAATGAAAATGATGCAGTAAATACTATTAAAGATTCTAGACAAGCTGGTATATGTACTGTTCAGTGCTATTGAGTGTTCTTTCGTTATTATCCATGTCACGCAAACTTGGTGACTAGAATTTCTCTTATTCATAAAATCAAGTCTTCATGAATATTTTTGACTATTTTTTTAGCAGTATAAATGAGTATAAATTTTGTATATATTCAAAATATTGTTAAATTAGAAATACCAGACTACTAGATACCTCTTCTTTTTATGTGATTTAACTGGACATAGGTAATGTTCTATTTGCTTTATGGTACTCTTGGATTTATTTATTTATTTTGTGTGTGTGTTCATGCATTGACTGATGTGAGAAAAGTGGAAAATTGTATTCTGAAAAGTATTACTCAGCTTCAGAATATTGCTCAGACGATTCTTCATTTTTATTTCGTTTCCATTTTTATTCTTTATTCGAGAAATAATTAAAGAAGCCTCTCAAAATCTTCTGCTATTACTGCACTTCAATAGTCCGGTCCCAGATCACCAGTGCACTTTGATAGCTTCATCTGCGTTTGTTTCTCTCTTTATCTCTCTTTCTCTCTCTCTCTCCTTCACTTTTCATATGACTCCTTGATTTCAACTTCTTTTACCGAAGGCAAGAATAATTTTACACGAGTGTTTGGTCTATTATTTTTTATTAAGTTTGTGTTCACATTCATATTAAGAAATTAACATAATACTTGTTTTTTTTATTGGTGGACTAATAATACTCGTTTATCCTTCGTTGTTTTCCTCTAAAAAAGCTTACTTCAAGCAAACAATCAAACAACAAATCCTTGATTCTTCAAATACATTTTGTTTGAATTTACTACATTTTCAACAGTTGGAATATGTTGGTTATCACTTTTCCATAAAAAAACCTACAAAGCTAAAGCTATCGAAGAAAAAGGAAAAGTTTTCTTTCCCTTTATCTTCATTAAATGTTGAATATCAATCATATTAGCAGCAGCTGGAAAATATTCTTGGTTTTTTGTTATCTATCATACTACCTAGTTAGTAGTATCTTACAATGTGATTTGTAATTACTGTCATTTATAAGATTAACTTTGGACATATACCCAATACGTTAACACTCTTACCAACCCTAACATATCATAATATCACTCTAATGCATATATATGTATGCAATTTTACTTTATATAGATGCATATGTGGGGGCATGGATCACAATACAGAAAAGGCCCGGAATCACTAAGAGGAATACAGCCAACAGCAATGCTTCGACTTCCATGCTATTGCTGTTCTCCAGGCTGCAGAAACAATATAGATCATCCAAGATCAAAGCCACTGAAGGATTTCAGAACTCTGCAGACTCACTACAAAAGGAAGCATGGCATCAAACCATTCATGTGTAGAAAATGCGGCAAGGCCTTTGCGGTTCGAGGAGACTGGAGAACTCATGAGAAGAATTGTGGCAAGCTTTGGTACTGTATTTGTGGTTCAGATTTCAAGCATAAAAGATCACTTAAAGATCATATTAAAGCATTTGGTCAAGGGCATTCAGCTTATGGGATTAACTGTTTCGATCATGAGGAGGAAGAACCTTCTTCAGAGATTGAACAGGACTGTGATGCATCTCTATGATTGATTAGCATGTACCATTATCTATCTACTGAATTATGCTTTTTTATGAAAGAAAAAATGGAGTAAAAGGTGAGCTTAATTATCTTTTTATGTGTGGTTTATATATAAAGGTGTGGTGAAAAAAGGATCTATAAATGAACTTTTTGGTTAACCTAAGGTGATATGCATATGTTGACATGTGGATGAATTTTACATTACAAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008795700.1	5.9e-121	zinc finger protein WIP2-like
Swissprot	Q9SVY1.1	2.4e-103	WIP-domain protein 2
trEMBL	A0A8K0IPR9	7.0e-124	Zinc finger protein WIP2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G57670.1	71.37	1e-103	372	NTT;WIP2	C2H2-type zinc finger family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G01153	AT3G57670.1	255	56	4	90	331	122	372	71.37	1e-103	372
AfisC7G01153	AT3G20880.1	363	125	9	1	331	65	410	52.07	9e-97	350
AfisC7G01153	AT1G51220.1	331	104	9	19	331	29	337	56.50	4e-96	348

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
-	-	-	-	-	-	-

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0016021	C	integral component of membrane
GO:0003676	F	nucleic acid binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006997	P	nucleus organization
GO:0008270	F	zinc ion binding
GO:0009813	P	flavonoid biosynthetic process
GO:0009860	P	pollen tube growth
GO:0010087	P	phloem or xylem histogenesis
GO:0010305	P	leaf vascular tissue pattern formation
GO:0010500	P	transmitting tissue development
GO:0010588	P	cotyledon vascular tissue pattern formation
GO:0031965	C	nuclear membrane
GO:0048364	P	root development
GO:1990058	P	fruit replum development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network