result

Gene information

Detail information of AfisC7G01252

Location

Gene	Chr	Start	End	Strand
AfisC7G01252	chr7	248680212	248685927	+

Sequences

CDS

>AfisC7G01252
ATGGGCTCTTTATGCGATTTCTGTGGCACACAAAGATCAATGATATATTGCAGATCAGACACTGCTTCATTATGTTTATCATGCGACAGAAATGTTCATTCAGCAAACACTCTTTCAAAGCGTCATTCTCGAACACTTCTATGTGAAAGATGCAATTCACAGCCTGCTATTGTTCGATGTGTAGAAGAAAATGCATCTCTATGCCACAATTGTGATTGGAATGGCCATAGCAACTTGCCTTCAAACAACGAACATAAGAGACGGGCTATAAAATGCTACTCTGGTTGTCCTTCTGCAGCAGAACTTTCTAGAATATGGCCCTTTATTACCGAGTTTCCTCAAATTGTTGATTCAAACTGCGAAGAAGGTATTGGATTAATGAGCATCAGTGAGAATCATGTTAGTACGTGCTGGGGAGCTCCAGGTGGAAATAGTAATGGAGGAGTAACTATGAAAGACATTGATAATGCATGGATTGGTTCATCTTCTAAATCTGCTGAAAATGTTCCTGCCTCAGGAGAATCAACCACACCTAAGTTTTCCGGCTCTGAAACAAAAGATACTGAAATGTGTAAAGGTGGATTTTTTGAAGATTTCAAAGTGGATGATGTTGATCTGACATTTGAGAACTACGAAGAGTTATTTGGTGGACCCAATGACCAGTCTGGACAATTTTTCGATGATGTAGGATTCGATTGCTTCTTTGATACTAAGGAAATGCCATGTCCGGGAGAATTAATGGGCGAGGCATCGGTGAAAAATGTGAAGTCAATGCAGCCAGAATACAGCAATGCAGCGTCTGCTGATTCCATGAATAAAGCAGAGCTTAGCGTATCATCTTTGCCAGCAAGGCCTGCTCGATCGAGTATATCTCTTACATTTTCAGGAATGACTGGAGAAAGTAGTGCGGGTGAATTTACAGAAATGTCCTCCATGCTTCTCATGGGTGAACCACCTTGGTATACTACTGGGGCTGAGTGTTCTTCGTATGCTGTAGCTAGCAGGGATAGTGCTGTCTTGCGTTACAGGGAGAAGAAGAAAAATCGCAAATTCGACAAGAAAATAAGATACGCTTCACGTAAAGCAAGGGCAGATGTTAGAAGGCGTGTGAAAGGAAGATTTGTAAAAGCAGGTGAAGCATATGATTATGATCCACTATGCCAAACGCGAAGTTACTGA

Protein

Gene

>AfisC7G01252
CATACCAATCTTCTCTTTTTTCTCTCTCTCTTTCTCGTCCTCTCCCTCCCTCTGAAAAAAATATCTGCAAACATAGTTGGGTTCTTCTACAGTTTTTGGTGAGTTTTAATTAGCTGCTTCTTTGACAAAGGCTGTAACTTTATGTTATTTGATCTATTTTTTTATTCTGGTTTTGAGAATTTATCCAGTATATTTTGTTGTATTGATGAGCTGGACCAACTGTAAATTATTAATTTGAGGGAAATATTGGATTTTTATTTGCTTTGAGCTGATTGTTGTTGATATTGTAAATGTTTGTTCATTTGGGTTATCTTGTAATATCTTATTATTTAGATCTCCGTGGAAAGTGATTATCCCGTATTTTGTTTCAGTGTGAACTTATAGAAACTACTACTGGTTATTTAAGTTTAATTCTCTTTTTTCTGAATTTATTTTAAGAATTGTTGAATACATGGGAAATCAACTCAAAGAAGTAGACTGCCATATTCATATATAATCAATTTTCTATTCGGGAATATCTGTGTTTTTACTTTTGACACTTTCGTGAGAAAGAAATTGAACGGAAAGGAGAAACCACTAGATTTACTTGTTTGCAGCAAAAGTTATAGTCTAGACTAGAGATTGTTTATCATAAAAAATTATACTTACCATGTGTTTTTACAAATCAAAAATTATAAGAACGTCAATAATATTAAAAAATCTTGATGTTAATAATCATAAAAATATACCAAGCACTTGATCTAGGCATGGTCAAATGTTTTTTTCCCAGAATATATGTATAAGCATTTCTAACAACGTTAAAACCCTGAATTTACTTGTGAATTTCATTTAAAATACGATGGAATATATTCAAACTACACAACACAGATAAACACTTTTGAAACAGATAATTTTTACAGGTAAAATTCTGCCATGAAATCGATTCAGAATCATTATTAGTTGTTACCAATAATGTTTTGTTGCATTATAAAATTTCAATAAAATATGATTAGTTTTTGGAACTTTCTTCAATCAATACCTTTCTAGACCACATCAAACTCTTTGTTTTATCCATTTAAACTTAGTACATGGGAGTTGCAATTAAGGTTGAACACAATAAAGTACTTTTGCACAATAAACTATTCCAATAAGACACTTTATTCCACATAAGCCTGTGTCTAATAGTTATCTTAGACTGAAAGTATCGCTAATTATGCTTCTTTTCATTGAATAGCAATCATGGGCTCTTTATGCGATTTCTGTGGCACACAAAGATCAATGATATATTGCAGATCAGACACTGCTTCATTATGTTTATCATGCGACAGAAATGTTCATTCAGCAAACACTCTTTCAAAGCGTCATTCTCGAACACTTCTATGTGAAAGATGCAATTCACAGCCTGCTATTGTTCGATGTGTAGAAGAAAATGCATCTCTATGCCACAATTGTGATTGGAATGGCCATAGCAACTTGCCTTCAAACAACGAACATAAGAGACGGGCTATAAAATGCTACTCTGGTTGTCCTTCTGCAGCAGAACTTTCTAGAATATGGCCCTTTATTACCGAGTTTCCTCAAATTGTTGATTCAAACTGCGAAGAAGGTATTGGATTAATGAGCATCAGTGAGAATCATGTTAGTACGTGCTGGGGAGCTCCAGGTGGAAATAGTAATGGAGGAGTAACTATGAAAGACATTGATAATGCATGGATTGGTTCATCTTCTAAATCTGCTGAAAATGTTCCTGCCTCAGGAGAATCAACCACACCTAAGGTATATGTGTATATGAATGAAATGTGCATATGTAAATGCTAGTTATTTACATACAACATATGTTTGTGTTAGTATAATGCAAAGCATTCACATTTGACAGTATGTTAGTGTCACAAGGACAAAAATGAATGTTAGTCTGTCACTGTATATAATTCATAATAGACTTCGTGATTTCATAATTTACACACTTTCATTGTGAAGTTGTATAAACTGGGAATGTGTTTGATTATGCAGTTTTCCGGCTCTGAAACAAAAGATACTGAAATGTGTAAAGGTGGATTTTTTGAAGATTTCAAAGTGGATGATGTTGATCTGACATTTGAGAACTACGAAGAGTTATTTGGTGGACCCAATGACCAGTCTGGACAATTTTTCGATGATGTAGGATTCGATTGCTTCTTTGATACTAAGGAAATGCCATGTCCGGGAGAATTAATGGGCGAGGTAATAAATTTTAAAGATTTTTTTAACCATCTTCACATTTCAGACCCATAATCTTAGTTATTAAGTATCTATGCAACGTCCATTGTGTTACAAGTATAAGATCACTATATCATATATATTTTTGTTTTTTTTATAATTGACAGGCATCGGTGAAAAATGTGAAGTCAATGCAGCCAGAATACAGCAATGCAGCGTCTGCTGATTCCATGAATAAAGCAGAGCTTAGCGTATCATCTTTGCCAGCAAGGCCTGCTCGATCGAGTATATCTCTTACATTTTCAGGAATGACTGGAGAAAGTAGTGCGGGTGAATTTACAGAAATGTCCTCCATGCTTCTCATGGGTGAACCACCTTGGTATACTACTGGGGCTGAGTGTTCTTCGTATGCTGTAGCTAGCAGGGATAGTGCTGTCTTGCGTTACAGGGAGAAGAAGAAAAATCGCAAGTATGTAAACAGTTATACATTCACATATTACTTTCTTCCTGTTCCATGCTTTATAGACTACAACTTCAACTCATAAATTCATAACTAAGATGTTAATCCATGCCAAGTTTGAAAACATAGCATGGCATCAATCATATTTAAGTTAAATACAAAACAATGATTTTATTTACGTTATTGAACCTTCAGATTCGACAAGAAAATAAGATACGCTTCACGTAAAGCAAGGGCAGATGTTAGAAGGCGTGTGAAAGGAAGATTTGTAAAAGCAGGTGAAGCATATGATTATGATCCACTATGCCAAACGCGAAGTTACTGAAAACATATATCCCTATATGTATATTTTATTTCATGGTGAAATTCTCTGGAACAACCCCGTAATAGAAATGATGCACGGTAATGTGAAATGCAAAGGAAGCTGTTTCTTGTTGTCTTTGTGCTGGTTCCTTGACAACTCTAATTATGGATTCAAGTCATAAAACTGATTTTCCTTCAGGTCTATCGACACAGAATGTGCCCCTAAAATAAGTTTAATGCTTTGTAAGCGTTTACAAGTATGTTTTTTTAGGATCTAAAGGATGTATTGCCTCCAGGTTATAGTCCAATATTATTAGCACATTTTTTAGATCATAATGAAAACTTACTTCTAAATGCTTCCAAAGGATTAAGATAAGTTTGGGATGCACATGAGGTGTTCTTGAAAGAAAATTTGTTTACGAACTTGAAGGCTATTATTGTCTGCAGTTGTACTACATTTTGCTCCATTTGCATGTCATGTTGCAATGTGCTATGTTCTGAATGGGTGAGTGACTTATGTCATTATTGATTCAACCTACAACACTTTTTTTTTTCTTTCTTCCCTATGAAGAAGTTTGTAAAGCATACGGTCTGGTTTAGCTTAGTGGTTTGTATTTTTATTATTCAAGTGCAAGGATGTTTGTGCTTTATTAATAAGAAGACATGTAAAGATACAATTTTTGTGCAATTGTTAATCAATTGTATTGACGCTGCTTTTGTTGGAATTGAGAATTATCTTTCAAACGTTCCCAACATAAGTAAATTATTCAGTCATTCTCCGAGAATGATTAAGTTCATTTTTGCTTGCAATAGACTTTACTATTATTGTTATAAAAAAATATTGAGCAATTTCGTCATTGTTTATGATTATAATAGCATCTCTAATAAAGTCTGGGATACATAACTAAAATTTGTAATTTTAAAACCTAAGTTTATTAGACTGTTGCTCGGTTTATAAATTTGCTAGACATATGCTTATGACATTTGTTTAACAGGTGCTTAAATCTCACAGATGCCTACGCATATGCATTTGTTTACTAGAGGCTTATATTATGGATGTTTGTTTAACTAGTGGTTAATTACTTCTTCAAACTAATAACCAATTTCAAAATTTCCTGCAACATTACTAGTTTTAGTTAACTATCATGTCATCTCCAACTGAAGAATTACCCAATACTTAATCTTACGTTCTTCAAAAATCGATTCTCCAACGGTGAAATAATCTATGCAGGGGAACTTTCTTTTTTCAGAAACACGATGAGCAGGTTTGAAAGAATTTGCCTAGCCATATCTATGGTTTTTTAGCATAATAAAACACATAGAAAGTTAGGTCCGCGCAGCAGTTGTGGTTGCCTTTAAACAAATAAAGTTCCCCTAGGCTTACAAAAATGCACCAACAAAACAATACATCTGCAACAGACAAATGCAATTGCAAAATGAGCATACTGTTACAAAATTACGTCTTCCTTGAATCAGTAGCCGCATATGCAACTTAACCTTTGTGGGAAATTTACTTTTCCAGATTTGCTTAGGATCATTGTATTTTCTACCTGAAAATTTTAACCGACTGCACATACAATTAACAGGTACTAAATTTAGAGTTTAGACCCCAAGAGAAGGAATCTGGAGGGGTAAAGAAAGAGATATGCTTGTCATCATGCTAAGAAATAGTGTAAGAGTCCCACTTTCTAGGCCACTACTAAAGGTAGTATTGCACTGAGCACTTGTAAATGCTTTGCTAGCAAAATGTCTTGGCCAGTTGTGATGTCAAAAAGCTCAGGTTAAAGAATGGCCATGTGTCCAACTGTGAACCAACAACCATGCTAGAAGGAGGTCTTTTCACCATTTTAGATTGTGAATTCCAAACCAATTTTAAGTTGTTCAGAGCTGTTGTTATATTCTTCAAAAAAGAAGAGAACTTGCTTTTTTTTTTGGATTTAGTCATCAGAGGAAGGTGGATACTGTTGCCATAGTATGCATGGCTTACCCCTTTTCCTCCGAAGGGCATCTTTATTTGGCAGCATATTCCATATCATTTTTCCGAAAGTGCAATGTTGAATTCCTCAAGGTTGGGAACACCAAGCCCACCTTGTAGCTTGTTCCTACAAACGAAATCTCAGACCACTGAACAAATGTAGAGCTGATGGTGCCTTGAACATTCCAAAAGAAACTTCTCCTGTCTGTTTATAAGTTATAACCCACGTTGGGGCCTTGAAGTAAGAAAGCCAGAAGGTGGAGATGGAGGTCAGGACTTCTTTCACAATCACAAGCCTACCAGCTCTTAGGAGGAAATGTCCTTTCCAGTTTGGAAGTTTGGAATCCACCTTACCAGTCCGGGGTTGTCAGTCTTCGTGATGAAGTTTTTCAAGTCTTAAGGCGATGCCGAGATAGGTAGTGAGGAAACTTTCCAGTTAAGGGAAGAGGCAACATCCAGGGCTTGATCGTTAGTGATTCCATCAGGCATGATAATCGAGCTTTTCATGAAGTTAATTCTAAGTCCTGGCCCATTAGTTTAAAACCAGGTAGAAGAAATTTCAGGACAACGATATGTTGGTTGAGCTAAAATGATGGAATTATCAGCATACTGTAAAGTGATCACTGCACCATCCACCAAGTCAGCTCCAAGCTTATCTATTAAGCCATTTCGAGTTACAAGTGATGTCTGGATAAAACATTGATGTAACACCCCATATTTTTGTAACATTATTTAGAATTTTTAATTAGTTAAATTAAATAAAATAATGTATTGATTAGACGATTGAGATTTGATTTCATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264346.1	2.7e-125	zinc finger protein CONSTANS-LIKE 9-like
Swissprot	Q9SSE5.1	4.2e-67	Zinc finger protein CONSTANS-LIKE 9
trEMBL	A0A5P1ETM8	1.9e-125	Zinc finger protein CONSTANS-LIKE 9-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G07650.1	49.39	1e-97	353	BBX7;COL9	CONSTANS-like 9

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G01252	AT3G07650.4	407	156	11	1	392	1	372	49.39	1e-97	353
AfisC7G01252	AT3G07650.3	407	156	11	1	392	1	372	49.39	1e-97	353
AfisC7G01252	AT3G07650.2	407	156	11	1	392	1	372	49.39	1e-97	353

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF06203.11	CCT	Motif	335	377	60.5	1e-16

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0007623	P	circadian rhythm
GO:0008270	F	zinc ion binding
GO:0009658	P	chloroplast organization
GO:0009909	P	regulation of flower development
GO:0010018	P	far-red light signaling pathway
GO:0010099	P	regulation of photomorphogenesis
GO:0010161	P	red light signaling pathway
GO:0010229	P	inflorescence development
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0030154	P	cell differentiation
GO:0043565	F	sequence-specific DNA binding
GO:0048576	P	positive regulation of short-day photoperiodism, flowering
GO:0048579	P	negative regulation of long-day photoperiodism, flowering

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network