result

Gene information

Detail information of AfisC7G01292

Location

Gene	Chr	Start	End	Strand
AfisC7G01292	chr7	260513957	260517092	+

Sequences

CDS

Protein

Gene

>AfisC7G01292
ATGAGGTTCAAAATAGCTTTAGGCATTGCGGAAGGGCTGTCATATCTTCATGAAGGCTGTGAAAGACCTATTATTCATGGAGATATCAAGGCATCCAACATTCTTCTCACATCTGATTACCAACCTCAGGTATAAATTAACTACAACATTGGAATACTACTAGTTGCAAAATCTGAAATTAAATATATTCTTTGGTTTTGAGGGCACTGAATATCAATGAAAGAATTTTAAGCCACTGCGTCTTAACAATTTTCGACGTTCATGTTAATTAACACAGATCTCCGATTTTGGGATTGCAAAACGACTTCCTAAAAACTGTGATCACCAAACCGTTTCTCCTATTGCAGGCACTATTGGGTAGGAACATTTACAAATTTTGAAATGATTACTTCTGAGTAAAGGCAGTGTATAGTTTAATATGCTTGAGTTAACCATGTTTTAAATTGATTGATACAGACATTTGGCTCCAGAAGCTTTTATGCATGGATTGGTTAGTGAGAAAACCGATGTATTTGCATATGGAGTTTTGCTGCTTGAGTTAATTACAGGACGTCATGCTGTTGACTCTTCTCAAAAGTACCTTGTCAATTCGGTACAATATTATTACTATCAACATTTATCCTTGGTGTTTATAAAAACTTTGAGCTTACACTTAGAGCCTGGTAAAATAATGCATATGTAATCTATCATAGATGATATTTAGCATGTTGAAGATGAGCCACAATTTAAGATAAGCAAAATTTAGGTAGACTAGAAGTTGTTTATACATACACATGCTGACATAAACATATATCAATTAGGATCACATATATCAATAAAGATTTGTTACACCTCTCTTTCGCTACATCCCATTCTACACCCCTTCGTATTTTAGAGCTACACAATTTGAAGTGATATGAAACTCCAAGAATGTTCTATCTACACTATGCAAATCATATCCCAAAAAAAAGGTCATTTTGAAACAAAAAAATAAAAATTAAAAAAGTAAGTAAACAAGCAAATATATAATTAAAAAATCAAAATGGGCATGGATTGTTGGACTGTAGCACTGGTGATGGTTAAAAAAGGAATAAATAGAAACAAAGGTCATGGTCTCAAATGGATATGCGGATAATGATTCATCATCCATATTCTCTGACTAGTGTGGGTGTTTGGGTGTACAATTTGTAAGCAACTTAATCTTATTACTGGAGAGACTATTTACATATTTAAAGCTCACTGTTGGTTTACATATATAAAGCTTATCATGTCATATATAACATGTCTTTACTATATGCTATTGAAAAGTGAGTCGTTTAATTAATTAATGCAGATTAGACATCAAGCGCTGAGGCATAGTTTCCCTTGTAATGGTTGACAAATCAAATCAAAATCCAAATGGTTAAAGGTTTACTATTTCAATACTATATAAAAATAACATGAGTACATTCTCTTTAAATATTTCTATTAGTGTGTGATTCGTACATGGTTTATATTTAATATGATAATTGAATGTCTTGTGAAAATATAGTTTTATTGTTTCATGTTAGATGCAAATTGTTAGTGATTAATAACTTTAATGTAATGATAGTAAGATAACTTTCGTAAATTGTCTTATGGATATTTCTTTTTTCTCTCATGTTGTAGTAATTGATAATAAGCTTTGCTTGATTTATGTAGACCCTAAGAAAGTGAGCTGATAAATATTTAAAAAGAGGTTGTTTTTATTGAATTATGTATAGTGTCAACAAAATTACATGTAAAGTGTTATTTAAATAATTCTCAGTATAGATTCACGTAGCTATGATAAGAAATGGTTGGGTCATATCAAATTCTATATTAAAACAATATGGCATGTTATTAAAATAATTTTCAATTTCAATTCAGTATTAAAACTTGATTTAAAGATGTCTTTTATTTTTTGAACATGGTTCATTAATGCTAACAAGTGTCAATCTTGGATATTGAACTCGTGACATTTAATCTCTTAGTCTAAACTACCAACCAACTAAACTAACCCTTTTGGCAAAAAACATGTCCTTTTATTATAAATTAAAAATAAAACTAAGTAAATGATTAGAACAAATTGAGGTTGAAGGTTAGAAATGATTTTTTTTCCTTACTTTTATGTGTGTATATCTAATAAGATCTGAATATTATGGCAAATGCAAAAATCCAAATTCATTCATTTTAGTTATTTTAGTACTTCTTTTGACTTGGTTATTTATGTTTGCTAGTCAAACATGTATGCTAGAAACATGTATGCAAAAAATATTCTCAAATCTGAATAACTATTGTTAAAAGCTTTTATACGTAAAGAGAAGCACAACTTTGATGGTATTTGTACATAAAGTTTGTTCCTTCTAAAATCTGAATTACTTTGATAGTGAAGAGAGTTCAAATGACTATAAAGAGAAGCAGGCTTCGAGGAACATCGTCACAAAGAGAATTATACATGCAAGTTGGAGCGGAATACATAAGACAAGTAACTACAGTCATAAAAAGTCACATTAATTCCTTAAAATCACCTTCAGGTCCATCTTCTCTTAAAGGTGAAATTTAGTAGCTCTTATTTTGTAATATCTTCAATACATTTGTTTTTGCTGTCTTCTTTACACATTTTTATTGCTATAGATGATGCTATGTCTTGCTTGCTACAATTGCAAAGTTCCAGTGAAGTTAAAGATTCGGAATCACCTATTTGCTTAAAACCGGGAAGCGGGTATTCTCATGTATTGTAAGTTTAAAACAGAGTATATAACTGCACACAGTTGTCGTAATTTAACTGAAATTGTGAATTCAAATTCAAAACTTGTTGTAACAGTTTTCCAGAGAATCAAGCAGATGCACTTGTTGTAGAAATTTTAGACAGTAAGAATTGCAGCAAAGGACAAGTGACAATTCAAATATCTTCATTGCAATATGGCCATGTATGCATGTTTTAATTTATAATTTCATTATTTTTATAATTTATTTTTGTGAAGTTCTTTAGCATTTAAGTCGTATAAATTTTAAGGGGGAACTGACTAAATGGTGGCCATTTCATGGGGAGGATGATGAATGCGTAGGCAAAATTCAACTTTGCATCAATATATCAGGCAGTTCTGAGAACATCAATTCATCAAAGAGTGGTCCAGTTGTAGAAACAATGATCTAG

Functional annotation

Database	accession number	e-value	annotation
nr	KAF7104140.1	1.6e-41	hypothetical protein CFC21_105063
Swissprot	Q8RXC8.1	2.7e-38	Protein ROP BINDING PROTEIN KINASES 2
trEMBL	M8CBH4	1.1e-41	Putative LRR receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G18910.1	69.03	9e-42	167		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G01292	AT5G18910.1	113	35	1	113	288	400	69.03	9e-42	167
AfisC7G01292	AT3G05140.1	112	36	2	113	241	352	67.86	9e-40	160
AfisC7G01292	AT5G10520.1	110	36	1	110	251	360	67.27	1e-39	160

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	4	112	79.1	3.1e-22

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005739	C	mitochondrion
GO:0005576	C	extracellular region
GO:0005829	C	cytosol
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0009556	P	microsporogenesis
GO:0009611	P	response to wounding
GO:0009623	P	response to parasitic fungus
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009814	P	defense response, incompatible interaction
GO:0010152	P	pollen maturation
GO:0012505	C	endomembrane system
GO:0019901	F	protein kinase binding
GO:0033612	F	receptor serine/threonine kinase binding
GO:0046777	P	protein autophosphorylation
GO:0051020	F	GTPase binding
GO:0071369	P	cellular response to ethylene stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network