result

Gene information

Detail information of AfisC7G01431

Location

Gene	Chr	Start	End	Strand
AfisC7G01431	chr7	292136176	292140610	+

Sequences

CDS

Protein

Gene

>AfisC7G01431
ATGGAGCAAGGTATTTCAATTACTCCTGAGGTGGAAGACCAGGTGTTTCATGATTTGCGCGATTCATTGAGAAAGAGGAAGGATCACATACCCAACCTTGGGAATATTACTATGGTAAGTTTTTGTGCATATTTTAAATTCTAGACAGAGGGTAACTATGCATATTATGATGTTGGAAGGTACATTAGCTAAGTAGAAACTTAATGTTGATCATAACTTGCTTTGAAATGATTTTATTTATAAAATAGCATGAAGTTTGGTTGTTATTGTTATTAAATTATATCTGAAATAAATTATGGCGGTTGTAAACATGAGTTGATAAATGTAGTAGTGATGAGTAAGAATATAGAGGGAGGCGATGAAGTTAAAGTAGGTTCATGTACATAAAACTCAAAATTATGTAGAGAATGTTAAGTCTTAATAAGAGTTGAAGTTGCAGTACCTATAACACCCCCAAACAAGAATGCAAAGTGCCAGAAATGTCCCCGAGGTGACGATGTTTGATCGACTTGCTGCTAAGGAAAAACTACCCCTGTAACAGTAAGTCAGACGTCTAGATGGACTAGACGTTTAAACTACTGCTGTTAGGGGCAGTAAACCCCTAACAACAACCGGTCGTGTCATTTGACTGCGTTTTCGCTTGTTTTACTTATTTGTTTTGTGTTGTGATTTCATTGCAAAATTATGGTATTAAATTGATATTATTTTGAAATTAATTTGAATTAATTTGAATATACACAAATTATGATGTGTTAAATACAAAAGATTGTGTTTAAATTACTATTTTGAAAAAGATTTGAAATAATTGAAATGCATCCAAGAAAATATAAATGGGCTTGAAACTGCTATTTTGAGTTAAGGTTATGGTTTGATTATTGTATACAATGCATTACTTTGCCTCGCTAATCCTATTTTGGTTGATGTTTAAAAGGTCATGAAAGAGTTAAATCAATTAGCTTGGTAAGCAATACAAGTTATGAATTAAATGGTTGAACGATGTTTGACATGCTCTTATGCAATATATTGATGTATATGGTATATGAGTTATTGTTAAACCACATGTTCGGGCTAATATATTTGAAATAATTTTTAATATGATTGATTTACAACATCAATCTACTGGTAGAGACTCCTCCTACAGTGTCACCCAGACTTAGACCCATGTACATGCTGAGTTGGAGGAAATATCAAGAAAGCACGCATAGTTGCTCATGAAGCATGAGGAGGAGATGTCATCACAAAGGGAGATGACAAAATGCATGAGGAAGAGATTGCCGCATAGAGGAAGCATGTCAACGCCTTGTATAAAATGTTCAACCGACAAATTGGAAGCAATGCGTCACCACCATCGCCATCGCCACAATCGTTAGTTTTTTTTGGTATTGACATGATTGTGTATGATTCATGTATTTATGATGTTAATTGTATGAACATGAAGTTGTGTATAAGATTGTCTAGACGTACATTTGCATTTGTGTTATTTTTATGAAATATTTATGGCGTTGTTTTACATTTTCCTATTATTTTTTTGTTATTTTTTGGATTTACATACATTTGGATATGAAATTGTATTGGTTTGGTGTTACATTTGCCTATGTGGCATTGCCAAAATGACTGATTTTGTGTCGTGGATCGAGGAGAAGAAAAGCAGCGGAAACGCTGCAAAATTGTTTCAGAAAAGTCGTTGGTAAGTCGCCGAAAAATCCAGAAATTACATTTTTATAGTGGCGTTTACAAGTCATCGATGTATCATCGAAAGCAACAAGTTGTCAGTATATCGTCAAAATAGGTCATCGAAAACTATGTCGTTGTCAAATCATCGGTATGAGCCTCATGAATATCGTCGGCAAGTCGTTGGCCTTGAGTTTGCCAGGAGGGTTTTACCAACGACCAAAATGTCATCGATATGTAGTTGGAAATGGTGCTACTGATGACATACCAAAACGTTCCGTCGGTAGGCCATTGTAATTGTAGCAGTGGCATCACCATCTGAAGTTAATAAACCACTGCAAGTGGATTGAGCATGACAACTAGAAGAAATCGAACAGTACTATTAACCTCAAATTTCAATTAATAATCCTTAACCATAACACTAAAACCAAAATACTTACTTTGCTTGTACAACTGATAACATAAATACTTTTAAGATCAAAATCCATGTCAACAACAACTTTGTTCTCAAGCACATACAATACCTCGATAGAAAAAGGAATGAGTTGAGTCCAACGACTACAAATTTCACTCTTCACATCATAGAACGAACAATCAATGAAAAGCCATGTACTAAGAAAATTATCTTTATAGTAAAAAACAATTGGAAGAGAAATACATTAATAACATTAAAAACTCAATCAACTGAAATAAATAACAAATGGTACTATACTGTATCATAAAATAGAAAAGTAGAAACAACAAAACAAACTACTACTACCCCCAACTCTAGAGATAATTATAAACCAACAACAACAAGAAAAACCAACAAACCTAGAAGATCACAAGAATACACAAACTAGCAAACCGTCTACATCGAAATCACCACCAATGAAATCATAACATCATCTATGGCATGCTACCAAGTTTTCCCTAAATTGAATCATCGTTATTAATGCAGAATGATCAAAAAATCATGTATGAATTCATGATCCAGAAATCAAGTGCGATGAAATATCGAATTAGATTTAGATGCTAAAATGGGATTCTGTTATTTGGTCGCAATTTAGATCCACTAGTTAAAAAGATATTAATTTTGTCCTAGAAACTAAGGGCCCGTTTGGTTTCGTTTTGAGTTTGTGTTTTGTGTTTTCAACCCACACTACAAAATACAAGAAAATGAGGGAATTTTTTTACAATTCTTAGTCATTATGACGATGGACGGAAAATAGAGGAGATGAATTGTTTTCCGTCCTTTCTTGTTATGTCCCAAAACACGAGAAATCAAATAAACTTGTTTTATGTTTTCTATGTTAATTTTGTTTTTTGAAATTGTGTGTTTTCCAACAATACATAAGAAATGCGTATTTTTGTTTAGACGAAAACGCAAAACTAAAAACAGCAAGTTAAACGGGGCCTAAAATAATAACGGTCTGTCATTGGTACTAAACAACCCATAAAGTTGGCCTCCACCATATTTTCCTAAATTCAAAATATGCAAATCACCTTGAAAAAAGACAAAATGAATAAAGCGTGCAGTTGCATAATTGAATTTTTTAGCATTAAAAATGATGAAAAGGCATTAAACTAGAAAAGTGCAACGTTCATGTGTTCTTGCATTTTCAAAACTTACGTAAAGCTTGATGAAACATCGTTTTTTAAATAATTCATGGGGTTAAAATACTACCTCTTAGGGATTGGAATGATGTCGACTGCGTGGTTGGAAAAGAGATTCTAGCACATGGATCCTTCCATCTAATTCATATTTAATGGTAGGAGTCCAACAAAATCTGTACGTACATACGTATATACATAACTTGTGTTATAAAAGTGCTTTGCGGCATGCGGCAAGTTAATTGATCTTTATCGCGCAGTATGTGCATCATACTGATAAGCAACATACCCGTGTATGGTCCAACCTACCGATATGGCACCAAACAACTATTCTCTTCCCTTGTAATTTACAATTTTAGAGACCAACCTAACCCTAACCAAACCCTAATTTCAATCCACGCAAAAAGGAACACAGAAAAAGAGGGAAAAAACAACCAAAGGTACATAACTTTATCAACAGAAAGTGGAGATCGAAGTTAAGGGAAAGGCAGTGGAGACGAAGCCAAATATAAGGAAAATGGGAGCTCCGAAGCAGAAATGGACGACAAAGGAAGAAGAAGCTCTTCGAGCTGGAGTCGTGAAACATGGAGCTGGAAAGTGGCGAACCATCCAGAAAGATCCTGAATTCAGTCATTGTTTGTCTACTCGATCCAACATTGATCTCAAAGTTGGCACCTTTTCATTTTTTCATTCCAAAATTTAGTATGAGCAATGCTACATTTACATGTCCACAGAATTTCGTGTACTGTCGAGGAATGGAAAATGTATTACTTGACCTAGATTGTAACATTTCCCCATGCTTTTGAAAAGTCTTACGTATTTATGCTCATTCAAGAAACGTCTCCATATTGAATATCCTCTGTTAATTATCACATATTACAATAGTTTTCTTTATTCTTTTAAGGATAAATGGAGGAATTTAAATGTAAGTTTCTGTGGTGGCTCAAGAGAAAAATCAAGGGCATCAAGATCGAAGACTCTTTCACCCCTTGCAGGATCTGTATTCCCTCGCGAGCTTGCTTCAGTCCCGTATCAAAATGATGGTTTCCGCCGAGAAGAGAAAAACCAAGGAAATCAAGATCAAATGAAGAACCCTAATTCCACAAAGAGGAAAAGGAAAACTTCTGGGTCAGTGACATACCTTACCTCCGTTTTGAAATACTGGATTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264146.1	7.5e-28	single myb histone 4-like
Swissprot	Q8W119.1	2.4e-23	Protein SINGLE MYB HISTONE4
trEMBL	A0A5P1ETS4	5.4e-28	HTH myb-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G49950.1	67.95	9e-25	109	ATTRB1;TRB1	telomere repeat binding factor 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G01431	AT1G49950.1	78	24	1	58	134	1	78	67.95	9e-25	109
AfisC7G01431	AT1G49950.2	78	24	1	58	134	1	78	67.95	9e-25	109
AfisC7G01431	AT1G49950.3	78	24	1	58	134	1	78	67.95	9e-25	109

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	62	113	32.8	5.2e-08

Gene Ontology

Accession	Ontology	Name
GO:0000784	C	nuclear chromosome, telomeric region
GO:0000786	C	nucleosome
GO:0003691	F	double-stranded telomeric DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006334	P	nucleosome assembly
GO:0005730	C	nucleolus
GO:0006357	P	regulation of transcription from RNA polymerase II promoter
GO:0009651	P	response to salt stress
GO:0009723	P	response to ethylene
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0046686	P	response to cadmium ion
GO:0031627	P	telomeric loop formation
GO:0033613	F	activating transcription factor binding
GO:0042803	F	protein homodimerization activity
GO:0043047	F	single-stranded telomeric DNA binding
GO:0070491	F	repressing transcription factor binding
GO:1990841	F	promoter-specific chromatin binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network