Detail information of AfisC7G01498


Location
GeneChrStartEndStrand
AfisC7G01498chr7302905221302913078+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020268336.19.1e-252histone-lysine N-methyltransferase ATXR7 isoform X2
SwissprotF4K1J4.16.1e-112Trithorax-related protein 7
trEMBLA0A5P1EXC61.0e-249GYF domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G42400.169.519e-94 342ATXR7;SDG25SET domain protein 25

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Ortholog group
SpeciesGenes
Allium cepag23802.t1
Allium fistulosumAfisC7G01498
Allium sativumAsa3G03655.1
Arabidopsis thalianaAT5G42400.1
Oryza sativaLOC_Os12g41900.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02213.13GYFDomain26630328.39.4e-07
PF00856.25SETFamily1121122572.64.3e-20

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0005737Ccytoplasm
GO:0005700Cpolytene chromosome
GO:0005719Cnuclear euchromatin
GO:0006342Pchromatin silencing
GO:0048096Pchromatin-mediated maintenance of transcription
GO:0008013Fbeta-catenin binding
GO:0008134Ftranscription factor binding
GO:0019827Pstem cell population maintenance
GO:0035327Ctranscriptionally active chromatin
GO:0042800Fhistone methyltransferase activity (H3-K4 specific)
GO:0044648Phistone H3-K4 dimethylation
GO:0045646Pregulation of erythrocyte differentiation
GO:0046427Ppositive regulation of JAK-STAT cascade
GO:0048188CSet1C/COMPASS complex
GO:0080182Phistone H3-K4 trimethylation
GO:1902036Pregulation of hematopoietic stem cell differentiation
GO:1902275Pregulation of chromatin organization
GO:1990188Feuchromatin binding
GO:2000179Ppositive regulation of neural precursor cell proliferation
GO:2000648Ppositive regulation of stem cell proliferation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11422SETD1, SET1; [histone H3]-lysine4 N-trimethyltransferase SETD1EC:2.1.1.354 Lysine degradationko00310

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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