result

Gene information

Detail information of AfisC7G01711

Location

Gene	Chr	Start	End	Strand
AfisC7G01711	chr7	345266900	345270516	-

Sequences

CDS

Protein

Gene

>AfisC7G01711
AAAATATGAGGTTGATGTAGACTTCAAATGATAAATAGCCCACATCTATGTTTGAAAGGCACAATGAACAAGGTTTTCCTATTATTATCGCCATTTCTGCCCCCACAGCAAACGCAAAAAAAATCAAAAATTAAATCAGCATCAATAAAAATCTTCTCTCTAATCTGCGCCACACATTATCCTGCGCCTCCTTCTCCCTTCCGGCGCGGAATAGGATTGTCGCCATCATGACAGCTTCATCGTCATCATCCATGGAGCCGCAACCGATCAACTGGACCTGGGACGAGGAGAAGTTGTTCGAAAACGCTGTCGCGGAGCTTGAGTTCAACAATGGAGACGAAAACGACGATTTCTACTACAGCGAGATTGCCAGCAGAGTCGCAACGAAGAGCGCGGCGGAGGTGAAGCTGCATTACGAGGTGCTGTTGGAGGATTTGGATGCGATTGAGGATGGTAGGGTTCCGATTCCGATTTATGTGGGAGAGGAGGTAAAGGAGAAGGATAAAAATGAAAACTTGGGGTATTTAGGGATGCAAAATAATGGCGGCAATGGAAGTAGTGGGAATGGATGCTCCAAAGCAGAGCAGGAGAGGAGAAAAGGGATTCCATGGACAGAGGAAGAACATAGGTACGTTAAAATTTTATTATTTCTTAATGGCACATCAGAAATTTTGGAATTTTGTTTAATTTTGACTGAAAGTCGAAGTACACGTTGCTTTTAAAGCCTACGATAAGTTATGTCTTAGTCCAAATGTAGCTATATATAACTACAGTGAAATCAGTACATGTATCAGTAAATATTTAAAAGTGAAGATACATTTCAAGCTTCTGATTGTTGTATGCTGAAGAAAATTATCATTCTCAGACCGCACAAGTTTTGCTGCAACAAGCAGAATAAAAATAACGGACCAGTTTATAATTGTGGAATATTTTATGCTACCACATTCATTCAATTGACTGAAAGTGGGTACTTCCAACTGTGAATAATTTGAATTGAAATGTTATTCAACAGATCCTATTACATCAAATATGCTTGTATGATATGTTGATAAATTTAGTCATTTCTCTCATCTATTTTATGAAGTGTATTTCCTATTTCGATATGCAAATGTGTCTTAGAATTGAATTTAGCTGCCTGTTGATTTGCTTTTATTCTGCGGAAAGTCAGAACAAAAGTGTGGCCCACACTCTCTTAGGGCATGCGTTCTTTATTATAGTAAAAAAAGTGCTTAATTTGAAAGTATTTATTGCAATAAGTGTTTTGTAGTTAATTGAAACTACTAAATATTAAGCATTTTTATTGTGTTAAAATTTTCAATGTTTATTGCGTTTTTAAAACACTTAATACTCACAAAAGGTTATTTGCGAAGAAAACACTTGGTACTGATTGGCACACAAGAAGCACAAACTGGTGTGGGGAGAAATAGAATTCGCACAGACTTTCATGAGGCTCCATGATCTTATCTCTTGTTCCCATATTTTGACTGAATTCATATTCGACTGTTCTACTAAAATTGAAAAGTAATAGACAATCAGCAAACGAACTATATAACGACAAACTTGAAAGTATTAAGTGTATTTGTAATTCCATGCAAGGATAAAAACTCAGCCACAGTTTTTGTAGTCATTTCTAATTTTCTAGTTAACATATAAACCAATTTAATCTTCTTAACTATGTGTGAAAGATTGGTCTTTTCAACTAATTTTAGTTTTCTTTAGTATTATTTATTTATTTACTTTTACATACATTATGACCTATTTTTTTGAAAATTCTGAATATATTTTTTAACCCTACTAGTAATAAAAGGAATTATTTGCATAAAATTTCAACTTTAGTTGCCAGACTGTTTATAAACTTATAAAGTTACATGCATATTCTATTGTACTTTAGTTCGAGAGGGGGATAATATGAAAGAGATAAAGTAAAATTGAACGAGGGTAGGTTTTGAATTTCATAAACAATGTAGTTTTCCGTATGACAATGCAATTATGACAAAAAATTTTTTTGTCAAATTCTACGTTAGAAACAAAATGTCAAAAGGAACTACAAAGCAAATTGCCAAATTGACCCTATTGAATTCATTCAAATCCTCAAAAACATCATTCTTACCTTTCGACAGAAAATTCTTTCAGTAGCAGAACCTGTTTCCATATTTGCTTGATAATACCCTAAGTATGAATTTATGATTTTGTACGCATCATTGTTTCCAAGTCGTTCAAGTCTCATGTATATATAACTTAGGTTGCCTTGTTTGGTCATCATCTTTGGTGACCTAGGAATTGGGCAGTCCTAGGTTATATAGCCTTACCTCAATCAGAGAGCAAATCCTCTGTCCAGTCAGACAAAGGGAAAAGTTGTTACTAACTCATGCTCCGTTTCTACCTCTATCGTTCATTTAATTATGGTTCCGCTAAAGGCATCACATAAACCCATCTACTTATACGCTAAAATTCATTAACACTAACATGTATTATACTTGTTATCATAAATAAATTTGACTTTGACGAAATTTATGTTAATATTATACAGATTCCATTTTAGTAAAATTATTTCCTAGACATTGCTCGATGCAGAACATCTGCTATGATAAAGTTTAACATATACGTTTAACCTATTTACAGTATCATATTAACTGCTTACTAATATTCTCATGAGACTCATGTATATGCAGTTTACTTTAAAAGTTTAAACTAAACAAGTAGACATTCAAGTTGATGGCAAACTTTGCTTTTAGCAGCATTCTTAATAATGGAGCATCTTTCGAGTGCTCTTACTAAAAGTTTGGTGTCTTTCCAGTCTTGCAATTTAAATGTGTGGTACCCGGTTGATGTCTCCTGCTTTTTAAAAATAGCATCATATTTCATGCAATAAGGGTGAGAAATTAACGTTTGACCCACATTTTCCCATATCTAACCTATCATGTATTCTTCTTTATAGACTCTTTCTTCTGGGTCTAGACAAATTTGGAAAGGGAGACTGGCGAAGCATATCAAGAAACTTCGTAATGACACGAACCCCAACACAAGTAGCAAGCCATGCCCAGAAGTACTTCATCCGCCACAACTCGATGAATCGGGACCGTAGAAGGTCAAGCATACACGACATCACAACGGTGAACGGTGGAGATGTAGCCTCCCCTCAAGCTCCAATCACAGGACAAGCCGCCAATGGGAACCCGGCACCTCACTATGGGCAGCCCCCATCCATGAAGGTGCACCACCACCCTGCTCATCATCATCCTCATCATTTACACCATGCACATCCTGTACCTGGAATGAATATATACGGTCATCCTGTAGGGCACCCTGTTCAGGGACATGCTGCCTCTGCTGTAGGTATGCCCGTTATGCTTCCACCTGGCCATCATGCTCATGTCCCTTATGTTATGCCTCCTCCTCCCCCTTATTCTTTACCTCCTCCACATACTATGCATCAATAGCTTCTTCTTCAGTGTACATAGATTTCTTTTTATAGATTGTTCTTTGTTTTGGTGTAACATACGATTTGACCACCATTTTTCTTTTGTATGTTTATGTTCAAATTGTTCATGATTTTGCATCCTCGGATGTAATTTGTATTATTGTTTTGTTTATTATGGGTCTGTTCTTTTTGGATA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_006376751.1	1.4e-73	transcription factor MYBS1
Swissprot	B8A9B2.1	3.7e-47	Myb-related protein S1
trEMBL	U5FTN2	1.0e-73	Transcription factor SRM1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G49010.1	47.31	1e-58	223		Duplicated homeodomain-like superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G01711	AT1G49010.1	334	113	13	9	299	1	314	47.31	1e-58	223
AfisC7G01711	AT5G08520.1	305	123	10	16	300	12	298	47.21	2e-58	222
AfisC7G01711	AT2G38090.1	196	81	4	10	194	23	209	48.47	2e-42	169

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	15	66	27.4	2.6e-06
PF00249.28	Myb_DNA-binding	Domain	127	171	44.0	1.7e-11

Gene Ontology

Accession	Ontology	Name
GO:0000122	P	negative regulation of transcription from RNA polymerase II promoter
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005829	C	cytosol
GO:0005634	C	nucleus
GO:0008270	F	zinc ion binding
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0009723	P	response to ethylene
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009787	P	regulation of abscisic acid-activated signaling pathway
GO:0009908	P	flower development
GO:0010116	P	positive regulation of abscisic acid biosynthetic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0046686	P	response to cadmium ion
GO:0030307	P	positive regulation of cell growth
GO:0048262	P	determination of dorsal/ventral asymmetry
GO:1901001	P	negative regulation of response to salt stress
GO:1901371	P	regulation of leaf morphogenesis
GO:2000469	P	negative regulation of peroxidase activity
GO:1905615

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network