result

Gene information

Detail information of AfisC7G01822

Location

Gene	Chr	Start	End	Strand
AfisC7G01822	chr7	365917778	365918790	+

Sequences

CDS

Protein

Gene

>AfisC7G01822
ATGTATAGAGTTAAGAAGGATAATGCATGGCCCAATAGACCCCTAATGCCTTTAACCTTAATTAACAAAATGGTTGCAATGGGCATTTTGGTAATAAGAGCTCTCTATATAATGTGGGGGAGAACTCAAACCCCTACAGCATCATTCGAAACTAGCAATCCTTACCTTAAAATATACTCCATTCTCATACATATCACCATGCCTAAACTTCAAAGGTTCAGGGGAGTTAGGCAAAGGCACTGGGGCTCTTGGGTCTCCGAAATTCGCCATCCCCTACTGTAAGTATACCTTATTTAAGCACTATTTACATCTTTTCTTACAAGTCAATATATAACTGACTTCTAATATATTTAATAACAGGAAGACGAGAATATGGCTGGGAACATTTGAGAGCGCAGAGGCAGCAGCACAAGCATACGACGAAGCAGCACGGCTAATGTGCGGTCCAAATGCGAAGACAAACTTCCCGATCGATCCTAGCCGTCCAATCCCACCACCACGATGTCTATCGCCTGCTTTAATGGCGAAACTGGAGAGATGCTGCATAGCTTCAATGGAAGAGGAGAAGAGCAGAACAAAAGTGAAAGAAGAAGAAATGTACTGCATGGAAAACGATGACGAATGCATTGAAGAGATGATCGAAGAACTTATTTACTACGGCTCGATTGAAATCAATCCCTGTTCCGGTTCTTCGTCAAATGGAAGCTGTTCTTCAATGAATTGGTACGGAAGTCAGTGAGGTTGGAATTTTAAAAGTTGCGAGGTTGTTTGTGTAAATAGGACTACATTTGCATTGCAATCCGACCGTGTGTGTTTTAGACATGGACGGGGTCTGAGGTGTCAGCATCTGTTTTAGCTCATTTTATTTATTTTTATTCGTTTTCGTTTCAATTATCTCGAGAATTCAGATAGGGTTAATTTAAGAATGTGTGTACGTATTTTATTCGAATTTGATTTTAGAATATTTGTTTTTGCGGCCTTCATGTTCATTTGCATGTGCACTTACTTCATCG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_017701773.1	4.1e-43	ethylene-responsive transcription factor ERF003-like
Swissprot	Q94AW5.1	3.2e-32	Ethylene-responsive transcription factor ERF003
trEMBL	A0A8B7MX29	1.3e-43	ethylene-responsive transcription factor ERF003-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G25190.1	47.90	7e-36	147	ESE3	Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G01822	AT5G25190.1	167	47	3	71	197	6	172	47.90	7e-36	147
AfisC7G01822	AT1G15360.1	65	15	0	67	131	1	65	76.92	3e-26	115
AfisC7G01822	AT5G25390.2	97	33	1	67	154	1	97	56.70	1e-25	113

Ortholog group

Species	Genes
Allium cepa	g15956.t1
Allium fistulosum	AfisC7G01822
Allium sativum	Asa3G03410.1
Arabidopsis thaliana
Oryza sativa	LOC_Os04g56150.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	72	121	39.4	4.7e-10

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0016020	C	membrane
GO:0006952	P	defense response
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0009555	P	pollen development
GO:0009651	P	response to salt stress
GO:0009737	P	response to abscisic acid
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0010105	P	negative regulation of ethylene-activated signaling pathway
GO:0010143	P	cutin biosynthetic process
GO:0010166	P	wax metabolic process
GO:0010224	P	response to UV-B
GO:0010286	P	heat acclimation
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0034605	P	cellular response to heat
GO:0042542	P	response to hydrogen peroxide
GO:0043565	F	sequence-specific DNA binding
GO:0071497	P	cellular response to freezing

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network