result

Gene information

Detail information of AfisC7G01826

Location

Gene	Chr	Start	End	Strand
AfisC7G01826	chr7	367368431	367370384	-

Sequences

CDS

>AfisC7G01826
ATGTCGGGTTCATCCAGCAATGATACCAAAGCCTCTGGCACAGATAGCATCTCTTCTGCAGGCAGAACTGCTATCACCCTCACTCTGGCAGTTGGGGGTGTAGTGGTACTAATCTCGGTTGCTTTTTTAATAACAAAGTACTGTCTGAAAAGGAAGAGTTTCTCGAACAATATTGCTAATACTGAAACCACCCATGTAGAATCGAAAGTCGAACTAGCATCAATAGAGAACTTTTTAGCCGAGCTCATGAAAGAAAAACCGATCAGGTTTAGCCCACAAAATCTAACAGAGTTCACAAATAACTACACAACCAAACTAGGTTCAGGTGGATTTGGTGAAGTATACAAAGGAAGATTTCCAAATGGGACGCAAATAGCAGTTAAAGTACTTCATAAAACCTTAAATAAAAGAGCTGAAGAACAATTCATGGCAGAAGTTGGTACCATTGGCAGAACATATCATATCAATCTAGTTAAACTCTATGGTTTCTGTTTCGAAGACACAACAAAAGCATTGGTATATGAATGCATGGAAAATGGGTCACTAGACAAGTACCTATTCGACAAGGAAAAAAACATACCCTGGATAAAACTTCAGGAAATTGCAGTTGGTACAGCAAAAGGTTTACGGTACCTGCATGAAGAATGCCAGAGAAAAATAATTCATTATGACATTAAACCAGGTAATATTCTTTTACGAGAAGACTTATTACCAAAAGTAGCTGATTTTGGATTGGCAAAATTGTGTGATAGTGAAAAAACACATGTAGCAGTAACTGGGGTTAGAGGAACACCTGGTTATGCTGCACCAGAAATGTGGATGCCATTTCCTGTAACACATAAATGTGATGTGTACAGTTTCGGTATGCTTTTGTTTGAGATATTGGGGAGAAGAAAAAATCTTGAATTTAACAATACAGAAAGTCAAGAATGGTTTCCAAGATGGGTGTGGAAGAAAACTGAAACTGGAGAGTTGGATAATGTGGTGAAATTATGTGGCATTGAGAAACCAGAAAGAGATCAGGCAGAGAGAATGTGTAAAGTGGCGCTATGGTGCGTTCAGTATCTGCCACAATCACGACCTACAATGAGCAGTGTTGTAAAAATGCTAGAAGGAAATGAGGAAATTGAAATGCCTGTAAATCCGTTTCTGTACTTGGATGCATATGATCCAGGTGAAGGGCTATGGACTGGAAACGCAACGAGTACATTCGGTGAAGGGACAGGTAGTTGGTCACAAAGTCGCCCACTTGTAATCAAATAG

Protein

Gene

>AfisC7G01826
AATAAATCTTATATTCAAACGTCGCAAGCAAAATTCTTTATCCCAACGAATTTAGCTGTGCAATACTCTACTGAAATCACAGATAAAGGATAGAAATCTGATTAGGAGGGAAATTGATACATGGTTAGCAAAATTAGAGCACTTTTACACAAGGTATTTGTATGTTTCTCCTTTCTTTTCTTTTTTCTTTTTTTCTTTCTTTTTTGTGAAAAAAAAGGGCACCGTAATAACTGTTTCTTCTCCGAATATGATTCCATTCGGCAACCAAATCTTCAAAATTAAAATAAATGAAAATGTTGTGCAGGCTAAAAAAACAGATGGTTCCAATAAAAAACCATGTATATTGATTATATGATATAGTGGAATATTGAGTTTAATGGCATGTGAACAACACAACTATACCTTTATTCAGATCAATCAACATGTCGGGTTCATCCAGCAATGATACCAAAGCCTCTGGCACAGATAGCATCTCTTCTGCAGGCAGAACTGCTATCACCCTCAGTAAGTCAAAATATAAAAATATGATTTTTTTTTTTCTTCTTCGATAATGTTATGTAAATTATTTCTCAGTTCTATCTTGATAATTACAGCTCTGGCAGTTGGGGGTGTAGTGGTACTAATCTCGGTTGCTTTTTTAATAACAAAGTACTGTCTGAAAAGGAAGAGTTTCTCGAACAATATTGCTAATACTGAAACCACCCATGTAGAATCGAAAGTCGAACTAGCATCAATAGAGAACTTTTTAGCCGAGCTCATGAAAGAAAAACCGATCAGGTTTAGCCCACAAAATCTAACAGAGTTCACAAATAACTACACAACCAAACTAGGTTCAGGTGGATTTGGTGAAGTATACAAAGGAAGATTTCCAAATGGGACGCAAATAGCAGTTAAAGTACTTCATAAAACCTTAAATAAAAGAGCTGAAGAACAATTCATGGCAGAAGTTGGTACCATTGGCAGAACATATCATATCAATCTAGTTAAACTCTATGGTTTCTGTTTCGAAGACACAACAAAAGCATTGGTATATGAATGCATGGAAAATGGGTCACTAGACAAGTACCTATTCGACAAGGAAAAAAACATACCCTGGATAAAACTTCAGGAAATTGCAGTTGGTACAGCAAAAGGTTTACGGTACCTGCATGAAGAATGCCAGAGAAAAATAATTCATTATGACATTAAACCAGGTAATATTCTTTTACGAGAAGACTTATTACCAAAAGTAGCTGATTTTGGATTGGCAAAATTGTGTGATAGTGAAAAAACACATGTAGCAGTAACTGGGGTTAGAGGAACACCTGGTTATGCTGCACCAGAAATGTGGATGCCATTTCCTGTAACACATAAATGTGATGTGTACAGTTTCGGTATGCTTTTGTTTGAGATATTGGGGAGAAGAAAAAATCTTGAATTTAACAATACAGAAAGTCAAGAATGGTTTCCAAGATGGGTGTGGAAGAAAACTGAAACTGGAGAGTTGGATAATGTGGTGAAATTATGTGGCATTGAGAAACCAGAAAGAGATCAGGCAGAGAGAATGTGTAAAGTGGCGCTATGGTGCGTTCAGTATCTGCCACAATCACGACCTACAATGAGCAGTGTTGTAAAAATGCTAGAAGGAAATGAGGAAATTGAAATGCCTGTAAATCCGTTTCTGTACTTGGATGCATATGATCCAGGTGAAGGGCTATGGACTGGAAACGCAACGAGTACATTCGGTGAAGGGACAGGTAGTTGGTCACAAAGTCGCCCACTTGTAATCAAATAGATGCAGATTTCCAAAAAGATTTTAAGTAGTCATGGTACTGGCAGAATTTCCATGATAAATGCAACGGGACAGTGTATTGTTACTTCATTAAATATCATTCATTTATATCAATCAGATAATGAGCACCTAAAAGTTTTTCTACCTTCATCATGTGTCCGGTTAAGCATATATAAATTCGTC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_017696039.2	6.1e-144	rust resistance kinase Lr10-like
Swissprot	Q9FLV4.1	3.9e-71	G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080
trEMBL	A0A8B7MSC9	3.4e-144	rust resistance kinase Lr10-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G24080.1	40.36	3e-72	269		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G01826	AT5G24080.1	384	195	7	18	392	64	422	40.36	3e-72	269
AfisC7G01826	AT4G32300.1	319	170	6	66	379	460	773	43.57	3e-70	262
AfisC7G01826	AT5G38280.1	324	179	8	89	404	320	640	41.36	2e-69	259

Ortholog group

Species	Genes
Allium cepa	g416276.t1
Allium fistulosum	AfisC7G01826
Allium sativum	Asa3G03407.1
Arabidopsis thaliana
Oryza sativa	LOC_Os04g56130.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	104	368	159.2	1.1e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0006968	P	cellular defense response
GO:0009506	C	plasmodesma
GO:0031625	F	ubiquitin protein ligase binding
GO:0044710	P	single-organism metabolic process
GO:0044763	P	single-organism cellular process
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network