result

Gene information

Detail information of AfisC7G02062

Location

Gene	Chr	Start	End	Strand
AfisC7G02062	chr7	415525315	415526014	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009416873.1	1.1e-26	PREDICTED: transcription factor ILI5-like
Swissprot	A2X9L8.1	5.3e-26	Protein POSITIVE REGULATOR OF GRAIN LENGTH 2
trEMBL	A0A804KHF7	7.9e-27	BHLH domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G26945.1	62.16	2e-21	97.4	KDR;PRE6	basic helix-loop-helix (bHLH) DNA-binding superfamily protein

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Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	13	51	23.0	5.2e-05

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005773	C	vacuole
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046983	F	protein dimerization activity
GO:0009536	C	plastid
GO:0009640	P	photomorphogenesis
GO:0009740	P	gibberellic acid mediated signaling pathway
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009826	P	unidimensional cell growth
GO:0010086	P	embryonic root morphogenesis
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0080113	P	regulation of seed growth

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network