result

Gene information

Detail information of AfisC7G02234

Location

Gene	Chr	Start	End	Strand
AfisC7G02234	chr7	447604431	447605466	-

Sequences

CDS

Protein

Gene

>AfisC7G02234
ATGAACTTCGACGACGCCGACGACCCCACCAACTCCGACTCTTCCAACCGCAGGCTCCCCCCAACCCCCTCCTCCTCCACCTCCTCCACAGTCAAATACCGCGAGTGCCTCAAGAACCACGCCGTCACGATCGGCGGCCACGCCGTCGACGGCTGCGGCGAGTTCCTCCCAGCCGCGTCCGACAACTCCATCGACTCCCTCCGCTGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAGGGAAACTTCCACCTCCGACCACAGCTCCCACCAGGTCGCCCACTTCTCCCCCTACTACCGCACCGCCACGGCCCCCTCCGGCTACCTGCACTACCCTCGCGCTGGCCCTCCCCTCCAGCAAATCCCTCCCGCCCTCGCCCTCCCATCGACCTCCGGCGGGCCCCACGAGGAATCCGCTTCCGAGGAGCGCAACCCCGACATGGTCGGACCCGGAAGCGGCAGCGGAGGGGACGGAAGCAGCATGAGGGCGTGCGGGAGAAAGCGGTTCAGGACGAAGTTCACGCAGGAGCAGAAGGATCGGATGCTGGACTTGGCGGAGAGGTTGGGATGGCGAATTCAGAAGCACGACGAAGCTGCCGTACAAGAATTCTGCAACGAGACCGGGATCAAGAGGCACGTTTTGAAGGTGTGGATGCACAACAATAAGCACAGTTTGGGGAAGAAGGCGCCGGAATTGCCTAGGGTTCCAGACGGCGGCGGTGGCAGTGGTGGTGCGGTGGGGTTTCAATGAAGTTTGTGCTGCATGTGTGAGATTTGTTCCAATGTTTATCGGATTAGGGTTAGTTAGAGTTAGTGATGATTACAAATTAGGGTTAGCGAGTTGTTTCATTTGTGCTGGTTAATTCATTTGGAAATTGGATTGGAGATGTTTATTGATGTGTTTTCTTCTTCTTCTTTTTTCCCTTTTTCCTTGTTTTTTTTTCATGGGTTATTTTTAGAGATTTTATGGCAATGGAGGAAGAGTAGCTAGTTAGCTTCTTAGTTTGTTGCATTTATTTCTGATTTGGTAGGTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_021629782.1	2.5e-60	zinc-finger homeodomain protein 1-like
Swissprot	Q6YXH5.1	1.2e-54	Zinc-finger homeodomain protein 1
trEMBL	A0A2I4FF48	2.0e-59	zinc-finger homeodomain protein 1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G24660.1	51.24	5e-50	194	ATHB22;HB22;MEE68;ZHD2	homeobox protein 22

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G02234	AT4G24660.1	201	72	4	29	229	45	219	51.24	5e-50	194
AfisC7G02234	AT2G02540.1	220	114	3	30	243	84	298	43.18	7e-49	190
AfisC7G02234	AT5G65410.1	200	87	3	29	228	71	252	47.50	2e-45	179

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04770.9	ZF-HD_dimer	Family	31	83	97.8	2.9e-28

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0009414	P	response to water deprivation
GO:0009793	P	embryo development ending in seed dormancy
GO:0010371	P	regulation of gibberellin biosynthetic process
GO:0010431	P	seed maturation
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0042803	F	protein homodimerization activity
GO:0043565	F	sequence-specific DNA binding
GO:0048574	P	long-day photoperiodism, flowering

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network