result

Gene information

Detail information of AfisC7G02236

Location

Gene	Chr	Start	End	Strand
AfisC7G02236	chr7	449672916	449674503	+

Sequences

CDS

Protein

Gene

>AfisC7G02236
ATGAGGAATACTTTTCTGAAAGCAATTTTACGAGTTTCTCCATGGCACAGGTAACACATGCATTCGCCGCTTAAGGAATGAATATGCTGCAATAGTTATGGTATTTCATAACATAGACAAATTTTACCCATGAATTTATTCGAAGCTATACAGCCAATGTATATACATGCTCCTATACTCCTATTTTGAATTTGAACCATCATTGTTCCTTGTGGATATTCCTAACATGTATCATGCACACCATCCACAGGTTCCTTCATGACAAAGTAAAGCCCCAAGTAGTGCACCGAGACATACGTGCAAGCAATGTACTCATAGACGAAGAGTTCAGAGCGCACTTAATGGGCGTCGGCCTGCCAAAATTCGTACCATGGGAAGTGATGCACGAAAGGACGGTCATGGCCGGGACGCACGGTTACCTAGCTCCGGAATTCGTGTACAGAAACGAACTGACAACAAAGAGCGACATGTACAGCTTCGGAGTGCTGCTTCTTGAGATCATTTCAGGGCGCAGACCCGCTCAGGCTATCGAATCCGTAGGTTGGCAGACAATATTCGAATGGGCGACCCCTCTTGTTCAGTCTCATAGGTACACCGAGCTTCTTGATCCTTATATCGTAGATGTTCCGGAAGCGGGAGTTGTGCAGATGGTTGTGGATCTTGTGTATTCGTGCACGCATCATGTGCCTTCTGTACGGCCCAGAATGTCGCATGTCGTGCATCAGTTGCAGCAGTTGGGATTGAAGGCTGCTGCATCTGGTACATCTTCTAATAGGGCGAGTACCAGAAGATACATCTGGTGCATCTGGATTTGGCATGATACGCGGGAATTTAATGAGTGCCGTATAAAGCTGAACCGCCCATTACTTATCATGGAATAACAAGACCCCTCCATATCATCATATCTACCGTAACATTAATGTCGGGTAGAATGCAGTACATGAGCATTTAATTATAGGTGGCGTTCTTTTTCTGACTACTTGCGTACGCTTTCATCATTTCTACGTATAAACTGAGATTTGGTCATGGAAAGAAGGTGACGAATGTGACCTGGTTAATTGCTTTTGACTTCAATTTCTTCATCCCATGACTATCGAATTACGTAGCACTGACCAACGTAGTTACTCTTATTCATTACTGTTATTGCAGGGCCAACTACCATGTTTGCGTCAATTGATTCAGTTCACGTTAACCTGTGAGTCTCATTTTCCATATGTTCAACAGCAACAATAGTTCTTGGAGACCTGTATGTTTAAAGAATAATCTTTTTTCTTGTATTCTTCCTATAGAATTATTCAAACAATCTCAACGCAATCAGTGTACTCTTGGCGCAACTTATACGCAATATTGTCGCATCGTCTCACACTGGAGAGATGAATCTGGCCAGCAGTGAACTGAAATAATGCATTGTGCAGTGAACTGAAGTGAAGCTGGCACTAGGGACTGCTGCGATGAGCTATCATGACAGACTACGCTGGCCTGAGCTGCTTCAATTTGCTGAAGGAAGGAAGCAACTGACCCAGGGACTGCTGCAATGAGCAAGCATGATAGCCTACACTGGCCTGGGCAGCTTCCATTTGCTAAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020253578.1	1.6e-82	C-type lectin receptor-like tyrosine-protein kinase At1g52310
Swissprot	Q9C823.1	5.7e-72	C-type lectin receptor-like tyrosine-protein kinase At1g52310
trEMBL	A0A5P1FMS1	1.2e-82	C-type lectin receptor-like tyrosine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G52310.1	82.42	4e-76	280		protein kinase family protein / C-type lectin domain-containing protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G02236	AT1G52310.1	165	26	3	18	179	381	545	82.42	4e-76	280
AfisC7G02236	AT2G33170.1	171	100	3	18	184	939	1107	38.01	6e-31	130
AfisC7G02236	AT3G24790.1	181	104	4	3	180	146	325	40.33	1e-30	130

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	17	176	69.7	2.1e-19

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0004714	F	transmembrane receptor protein tyrosine kinase activity
GO:0030246	F	carbohydrate binding
GO:0005524	F	ATP binding
GO:0009506	C	plasmodesma
GO:0019901	F	protein kinase binding
GO:0046777	P	protein autophosphorylation
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network