result

Gene information

Detail information of AfisC7G02343

Location

Gene	Chr	Start	End	Strand
AfisC7G02343	chr7	471030286	471032024	-

Sequences

CDS

>AfisC7G02343
ATGTTTCTAACACCCAATGATGGACTGAAGGTCATATTACTGAGTTCAGGATTCGGTGGTATAGATTTCAAGTTGACTGTAGATGCCAAATGCAAATTCCCTTCATTTTGCGATCCTTATGACGATTCCAACTATAGCAAATGTACTTGCCATACTGCTTCTGATAAGGTAGACTATTTCCAATATATATGCCCTAATTCACCAGAGAAGGGATGTGGCTTAGTAGTGGATGCACCACATGCTTCAAACTCCACAGACAGAGACAGTTTTTACCAGTTGGTTAATTTTGGGGAGCTATCTTTCTACAGTGTATTCTATCCTACAGATGCAGTTACAGGAATACATGATATAAGTACTTGCAAAGATGCATGCATGAGAAACTCTACTTGCGTTGCTGCATTCTATACAGCTGAGATTGGTGAACCTGACATCTTTAGTTGCTACTTGCCATCTGTTATTTTAGCAGGGGACCCAGTACTAATGCCTACAAGTCTTTTGCATGCATCCGTCAAGATTCTAGCTGTAAATTATGCAGATCCTATCCCTGATTTTACTCCTCCTCCTACTTCTTATGATGATGATGATGATGATAAAGACATCAACTTGAAAAATTCATCCTTCTCAATGATAAAGAAGGCATCAGTTATCGCGCTCTCCGTTAGCATATTAGCAATCCTTTCATGCGTTATTTGGTGGAAATATAGAAGAACAAAATGGAGCAAGCATAACTTTCTCGACCAAGTCCTAGGGGGACCGATACAGTTCTCATACAACGAATTATCTCAAGCAACTAAGAAGTTCGTGACAATGCTAGGAAGAGGAGGTTTCGGTATAGTCTACAAAGGCAAACTAAAGAATAATACTTTGATCGCTGTGAAGAGACTTTACAGCATTGAACAAGGAATGGAGGAGTTTTTAGTGGAGATGAAGACTATGGGCAGCATCCGCCATATCAATCTTGTAAAACTTCTCGGGTTCTGCGCTAATGAATCGAATAGGCTGCTAGTTTACGAGTATATGAGCAAGGGTTCATTGGATCAATGGATCTTCAATGAGAAAAAGAAGAAAGAACTCAACTGGGAGAGGAGAAGAAGCATCATACTCCAAGTAGCTAAAGGACTTGCGTATCTCCATGAAGAGTGCGATCAGAAGATAGTGCACTTGGACATGAAGCCCCATAACATTCTTCTAGATGAAGATTTCAGTGCTAAAATATCTGATTTTGGACTAGCTAGATTCATCGATAGAGATCAAAGCCATGTGATTACGGGTATGAAGGGAACAATAGGGTACTTAGCTCCAGAATGGGAGCATTCAAGAATCACAGTTAAAGTCGATGTGTACAGTTTTGGGATTGTGTTGTTGGAGGCTGTGAGTGGAAGGATGGTATTGGATTACTCGCAAAAGGACACCGATGTGATTCTGTTACGCGTTTTGCAAAGGAAGGCGACTGAAGGGCGGTTAGTTGATATTATAGATAAGAAGATTGTGGACTGGAAGAACCATGAACAAGACATGATATTGATGATAACTGTTGGAGCTTGGTGTTTATGTGAGGATCCGGCTAAAAGACCGTCCATGTCGACTTTGGTTAAAATTTTCGAGGGCACGATCAAGATGGAGCATGAGATAGATTTTAATTTTGCTCATGTTCTGGTGCTTTCTTCTAAATAA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	KAF6173335.1	1.0e-114	hypothetical protein GIB67_027030
Swissprot	Q8RWZ5.1	2.4e-76	S-domain-2 (SD2) receptor kinase 5
trEMBL	A0A7J7P1M4	7.5e-115	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G32300.1	35.29	1e-79	294	SD2-5	S-domain-2 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G02343	AT4G32300.1	510	299	7	31	536	284	766	35.29	1e-79	294
AfisC7G02343	AT5G24080.1	340	187	6	206	537	64	402	42.35	3e-75	279
AfisC7G02343	AT1G34300.1	514	305	13	40	544	282	766	33.27	1e-74	278

Ortholog group

Species	Genes
Allium cepa	g113029.t1
Allium fistulosum	AfisC7G02343
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	269	532	179.0	1e-52

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0006468	P	protein phosphorylation
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network