result

Gene information

Detail information of AfisC7G02400

Location

Gene	Chr	Start	End	Strand
AfisC7G02400	chr7	480373187	480373865	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020275616.1	2.5e-95	probable serine/threonine-protein kinase At1g54610 isoform X1
Swissprot	F4ICB6.1	6.7e-93	Protein IMPAIRED IN BABA-INDUCED STERILITY 1
trEMBL	A0A5P1EFW9	1.8e-95	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G18670.1	77.23	6e-96	346	IBS1	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G02400	AT1G18670.1	202	46	0	1	202	137	338	77.23	6e-96	346
AfisC7G02400	AT1G74330.1	203	47	1	1	202	127	329	76.35	2e-93	338
AfisC7G02400	AT1G74330.2	203	47	1	1	202	127	329	76.35	2e-93	337

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	1	200	200.1	3.7e-59

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000380	P	alternative mRNA splicing, via spliceosome
GO:0001223	F	transcription coactivator binding
GO:0002944	C	cyclin K-CDK12 complex
GO:0002945	C	cyclin K-CDK13 complex
GO:0003677	F	DNA binding
GO:0009615	P	response to virus
GO:0005829	C	cytosol
GO:0004693	F	cyclin-dependent protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0005615	C	extracellular space
GO:0005703	C	polytene chromosome puff
GO:0005730	C	nucleolus
GO:0005794	C	Golgi apparatus
GO:0006282	P	regulation of DNA repair
GO:0006367	P	transcription initiation from RNA polymerase II promoter
GO:0006368	P	transcription elongation from RNA polymerase II promoter
GO:0006909	P	phagocytosis
GO:0007088	P	regulation of mitotic nuclear division
GO:0008024	C	cyclin/CDK positive transcription elongation factor complex
GO:0008284	P	positive regulation of cell proliferation
GO:0008353	F	RNA polymerase II carboxy-terminal domain kinase activity
GO:0016605	C	PML body
GO:0016607	C	nuclear speck
GO:0022008	P	neurogenesis
GO:0030097	P	hemopoiesis
GO:0030332	F	cyclin binding
GO:0031297	P	replication fork processing
GO:0033129	P	positive regulation of histone phosphorylation
GO:0040018	P	positive regulation of multicellular organism growth
GO:0042795	P	snRNA transcription from RNA polymerase II promoter
GO:0043405	P	regulation of MAP kinase activity
GO:0043484	P	regulation of RNA splicing
GO:0044822	F	poly(A) RNA binding
GO:0045944	P	positive regulation of transcription from RNA polymerase II promoter
GO:0046579	P	positive regulation of Ras protein signal transduction
GO:0046777	P	protein autophosphorylation
GO:0048366	P	leaf development
GO:0050434	P	positive regulation of viral transcription
GO:0051147	P	regulation of muscle cell differentiation
GO:0070374	P	positive regulation of ERK1 and ERK2 cascade
GO:0070816	P	phosphorylation of RNA polymerase II C-terminal domain
GO:0071157	P	negative regulation of cell cycle arrest
GO:0071345	P	cellular response to cytokine stimulus
GO:0090277	P	positive regulation of peptide hormone secretion
GO:0097322	F	7SK snRNA binding
GO:1900364	P	negative regulation of mRNA polyadenylation
GO:1903839	P	positive regulation of mRNA 3'-UTR binding
GO:2001168	P	positive regulation of histone H2B ubiquitination

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network