result

Gene information

Detail information of AfisC7G02557

Location

Gene	Chr	Start	End	Strand
AfisC7G02557	chr7	513229780	513231348	+

Sequences

CDS

>AfisC7G02557
ATGTCCAATGTCCCAAAAACGTTTCTCATCTCTCCTCCCGCTTTCTTCCTCCGTCATTTGTCTACCAAATCCATCGTCCCAACTGCTCCGAAACTGAAAAACATATTCAGTCGTTGCCGCCCCCACGCTCTAGACGAAGCAAGACTTGCTTTAATCGAGTACCTACATTTAACCCGCTCCATCCCCTTTCCCCTCTCCGACCAAATCGTCTCCAACTCTCCGATCTCTCTCTCCTCCTTCCTCTCCATCATCCCTTTCCCTTCCCCGGCCGACCCTTCCTCCTTCCTTTCCATCATCCGCAAGTTCCTCTCCTACCACCCTATTGATGAGTTCGACTTCTTTTCCGAATCCATTGGCCTCCCGCCTTCCATCATTCCGAATGACTCAATCTTCCTTTCCGACGACCCTATTCTTATCGAGGCTGTGTCCGTTCTGGTCAGGTTTGGGTTTCCATTTCGAAAATTGGGTTTGATGCACGAAGTATTACACGAGGAGGAGGATAAGTTGAGGACGAGATTGAAAGGGTTGGATGAGTTGGGATTTGAACGGGCTTGTGTAATCGGTGCATGCCTTGCCTTTCCGTGGGTTTTGAAGACCGATCTAGAAGACAAGGTAAGGTTTTTGTTCCAGGATTTGAAAGCGCTATTGCTTGAGTGTGGTTTGAAATCGAATGACATAAACATGGCGTTCGATATCTGTAGGAAAGTGCGGGTTTTGTATAAGAATGGAGCAGAGATCGGGAGGATGGGAGAGATTCTGGCAAGGAATAGGAGGATCTTTTTTGAAGTTAATGAGGATGTTTTGAGGCGGAAGTTGGACTTTTTTTTGAATTTGGGGATGGAGAAGGAGAAGGTAGGGGTGTTTGTTTTGAGTCATATGCATGTTTTCGATTCAGAGTTCGAAAGCTTGGATGTTTATGTGCCAGAAATTTTGGTAGATGTTTTAGGTTTAAGTGAACCTGAAATCGAAAGGGTTCGGAAGATATATCCTCATGTGTTAGGGAAGAATATTGTAGGAAACTTTCCGATGATTTTGAAAGCTTTGGATTTGAATAAAAGGTTTACTGATCAAATGTTGAATACGGAACTTCATTGTTTGAAGGTTTTGAATAGTAAAGTTACCCATAAGTTGTGTACTGATAGTGATATGATGGAGGATGAGTTTTTAAGGGATATGGAGGTTACTAAGTGTCGAAAGAAAATCAAAATTTTAGATGGTAAGATCCTTTTTTTGTCTAGCATAGGATTTGGGAAAAACAAAATTACATCAAAGACTGTATCGGCAATACGGGGTACAAGAGAACAACTGCAAGAGAGATTCGATTGCATCATTGGATTTGGAATTAAACATAGCGATGTTTGTAGAATGATAAGTGCTTATCCTATATTTATAAATCATAGCAAAGAACAGATTCATAAGAAACTGAGTTATCTTTGTCATGA

Protein

Gene

>AfisC7G02557
GAAAGAATGGGAAAGAAGGGAAAATGGTCCGTCGCCTTTGCCGTTCCTCGATCGTCATTTAATTTTTTTTTTTTAATTTCGATGTAAGTACCTTTACCAATACCATTGGCGACAGTTCATTGAAGCGATGTCCAATGTCCCAAAAACGTTTCTCATCTCTCCTCCCGCTTTCTTCCTCCGTCATTTGTCTACCAAATCCATCGTCCCAACTGCTCCGAAACTGAAAAACATATTCAGTCGTTGCCGCCCCCACGCTCTAGACGAAGCAAGACTTGCTTTAATCGAGTACCTACATTTAACCCGCTCCATCCCCTTTCCCCTCTCCGACCAAATCGTCTCCAACTCTCCGATCTCTCTCTCCTCCTTCCTCTCCATCATCCCTTTCCCTTCCCCGGCCGACCCTTCCTCCTTCCTTTCCATCATCCGCAAGTTCCTCTCCTACCACCCTATTGATGAGTTCGACTTCTTTTCCGAATCCATTGGCCTCCCGCCTTCCATCATTCCGAATGACTCAATCTTCCTTTCCGACGACCCTATTCTTATCGAGGCTGTGTCCGTTCTGGTCAGGTTTGGGTTTCCATTTCGAAAATTGGGTTTGATGCACGAAGTATTACACGAGGAGGAGGATAAGTTGAGGACGAGATTGAAAGGGTTGGATGAGTTGGGATTTGAACGGGCTTGTGTAATCGGTGCATGCCTTGCCTTTCCGTGGGTTTTGAAGACCGATCTAGAAGACAAGGTAAGGTTTTTGTTCCAGGATTTGAAAGCGCTATTGCTTGAGTGTGGTTTGAAATCGAATGACATAAACATGGCGTTCGATATCTGTAGGAAAGTGCGGGTTTTGTATAAGAATGGAGCAGAGATCGGGAGGATGGGAGAGATTCTGGCAAGGAATAGGAGGATCTTTTTTGAAGTTAATGAGGATGTTTTGAGGCGGAAGTTGGACTTTTTTTTGAATTTGGGGATGGAGAAGGAGAAGGTAGGGGTGTTTGTTTTGAGTCATATGCATGTTTTCGATTCAGAGTTCGAAAGCTTGGATGTTTATGTGCCAGAAATTTTGGTAGATGTTTTAGGTTTAAGTGAACCTGAAATCGAAAGGGTTCGGAAGATATATCCTCATGTGTTAGGGAAGAATATTGTAGGAAACTTTCCGATGATTTTGAAAGCTTTGGATTTGAATAAAAGGTTTACTGATCAAATGTTGAATACGGAACTTCATTGTTTGAAGGTTTTGAATAGTAAAGTTACCCATAAGTTGTGTACTGATAGTGATATGATGGAGGATGAGTTTTTAAGGGATATGGAGGTTACTAAGTGTCGAAAGAAAATCAAAATTTTAGATGGTAAGATCCTTTTTTTGTCTAGCATAGGATTTGGGAAAAACAAAATTACATCAAAGACTGTATCGGCAATACGGGGTACAAGAGAACAACTGCAAGAGAGATTCGATTGCATCATTGGATTTGGAATTAAACATAGCGATGTTTGTAGAATGATAAGTGCTTATCCTATATTTATAAATCATAGCAAAGAACAGATTCATAAGAAACTGAGTTATCTTTGTCATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008779561.1	4.6e-95	transcription termination factor MTEF18, mitochondrial
Swissprot	Q9M219.1	2.9e-62	Protein SUPPRESSOR OF HOT1-4 1
trEMBL	A0A835RZI7	9.0e-101	Transcription termination factor MTEF18, mitochondrial

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G60400.1	31.68	2e-63	240	SHOT1	Mitochondrial transcription termination factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G02557	AT3G60400.1	464	293	7	29	479	19	471	31.68	2e-63	240
AfisC7G02557	AT4G19650.1	441	264	12	67	478	90	494	25.40	5e-23	105
AfisC7G02557	AT5G06810.1	481	297	13	38	478	617	1059	22.04	5e-20	95.9

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02536.11	mTERF	Family	232	478	39.9	2.2e-10

Gene Ontology

Accession	Ontology	Name
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006996	P	organelle organization
GO:0044444	C	cytoplasmic part

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network