Detail information of AfisC7G02649


Location
GeneChrStartEndStrand
AfisC7G02649chr7526466309526471149+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAIN76759.16.4e-82CONSTANS-like protein
SwissprotQ9LJ44.21.0e-39Zinc finger protein CONSTANS-LIKE 12
trEMBLA0A0H3UK234.6e-82CONSTANS-like protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G21880.138.811e-60 230BBX10B-box type zinc finger protein with CCT domain

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag42933.t1; g490162.t1
Allium fistulosumAfisC7G02649
Allium sativumAsa3G02771.1
Arabidopsis thalianaAT3G21880.1; AT4G15250.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00643.21zf-B_boxDomain84824.91.5e-05
PF06203.11CCTMotif34538762.03.6e-17

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0003677FDNA binding
GO:0009416Presponse to light stimulus
GO:0048580Pregulation of post-embryonic development
GO:0048608Preproductive structure development
GO:2000241Pregulation of reproductive process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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