result

Gene information

Detail information of AfisC7G03463

Location

Gene	Chr	Start	End	Strand
AfisC7G03463	chr7	679990952	679992177	+

Sequences

CDS

Protein

Gene

>AfisC7G03463
CTTTGGCCTGTCTTCTCATCACAAATTTAGTTCTGTACAGTTGTTAACTAATCCTATCCATTTCTCTATCACCAATCTCTCTCTTTTCCTCCATCTCTCTCCTTTTTTCATTTGCTTCCGTGACTGAATGGATCAAATTACATGATTCATGTGATAAAAATCATTTCATTTCTACCATCAGAGTTTGCATTGTCAAGAAAGCATTGCAACATTCCCAGAAAAATACATTCGACATTTTGTAATGGATGTTTCTTCTTCATCACAAGAAGCTACAAGTGATACTTCATCTATCATAAGAAGGTGATTTATTTTTACAATATTCTATGTACTCTTGAACGATTTTTTAACCATTTTTTCTCTCTTTAAATAAATAGAAAGAAAGGTCAAAAGATGATGGTCATGGTTAAAATAGAGTCGGCGGTGGATAAAAAGAAGAATGAAGGACCTCCTTCTGATTTCTGGTCATGGAGAAAATATGGACAGAAACCTATTAAAGGATCTCCATATCCAAGGTACTGGCTAGATACTATGGTAGTTCATAAAATAACTAGTCAATGGTTATAGGTTCGTTCATTGTATACGTATATACAGGGGCTATTATAGATGTACCACTTCAAAAGGTTGTTCAGCAAGAAAGCAAGTAGAGAGATGCAGAACAGATGCATCTATTTTAGTCATAACCTACACTTGTGACCACAACCATGGCACAAATTCTACACTTCGAAAATTTCAGAATCGAGAAGGCGGATGTACTCAAGAAAAGGCGAAAGAAGCACGAAATGATAGTACAATGACTAGTGAGAAGAAACTAGAAACACTTGTTGAAGAAGAAGAAGTAATAGGGTTGAAGCATGAGCATGAAAATGGCAACGTCGACGACCTATTAGTAACTAATACAACCGAAGAAGGTGATAGCGATTTTTTTAACGAGCTCGGAGAGTTGCCCATGTCTTCAATGTTTACTAGCTTTGTAAGTGGTAGCATCTTTGATGACAGGATTCCTCTTCTTTTCTCCCTTAACTAGTTGACCTTTACTTACTATATTTGCTTGTATTTATGTGTATGAGTAAAATGTGATGTTACTAATTTCGTAGTTTTCCTGCATTTATATGTAAATTGGGTAAACTATTATACAAACAGATTATGTATTTCCATTTGTTTGTTTGATGAGCCTTTAGGACTTCTCGTTTTCAGAAAATGGAATATAATAACAGGCCTAAAATCAG

Functional annotation

Database	accession number	e-value	annotation
nr	RWR94563.1	1.2e-36	DNA-binding WRKY
Swissprot	O64747.1	8.1e-25	WRKY DNA-binding protein 35
trEMBL	A0A443PUY0	8.9e-37	DNA-binding WRKY

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G34830.1	64.77	1e-30	129	AtWRKY35;MEE24;WRKY35	WRKY DNA-binding protein 35

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G03463	AT2G34830.1	88	30	1	17	103	185	272	64.77	1e-30	129
AfisC7G03463	AT1G30650.1	101	42	1	4	103	174	274	57.43	2e-29	125
AfisC7G03463	AT4G01250.1	203	105	5	4	199	95	283	37.93	2e-29	125

Ortholog group

Species	Genes
Allium cepa	g208555.t1
Allium fistulosum	AfisC7G03463
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	47	103	84.5	4.4e-24

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0007263	P	nitric oxide mediated signal transduction
GO:0009555	P	pollen development
GO:0009626	P	plant-type hypersensitive response
GO:0009739	P	response to gibberellin
GO:0009793	P	embryo development ending in seed dormancy
GO:0010150	P	leaf senescence
GO:0010200	P	response to chitin
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0043531	F	ADP binding
GO:0051607	P	defense response to virus
GO:1990837	F	sequence-specific double-stranded DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network