Detail information of AfisC7G03491


Location
GeneChrStartEndStrand
AfisC7G03491chr7684453082684460271+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrOAY79221.12.1e-24Protein RKD1
SwissprotQ9M9U9.13.6e-18RWP-RK domain-containing protein 1
trEMBLA0A199VQN91.5e-24Protein RKD1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G18790.152.525e-33 139AtRKD1;RKD1;URP5RWP-RK domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag117834.t1
Allium fistulosumAfisC7G03491
Allium sativumAsa3G02223.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF05266.11DUF724Family283443122.22e-35
PF02042.12RWP-RKFamily52957673.77.5e-21

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005773Cvacuole
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009793Pembryo development ending in seed dormancy
GO:0042803Fprotein homodimerization activity
GO:0051302Pregulation of cell division

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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