result

Gene information

Detail information of AfisC7G03791

Location

Gene	Chr	Start	End	Strand
AfisC7G03791	chr7	733370028	733371248	-

Sequences

CDS

Protein

Gene

>AfisC7G03791
TCTACACTCCCTCTTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCAATCATTAACCCCTCTTCCCCCTTTCTCTCTCTTTCCAACCCTCTGAAAACCCTCCTTTCCTCCAACAATCACCCAAATCAACCATGTCATCGGACGCCATCGCCAACTCCAACGGCACCAACACCACCAACAGCAACAGTCAGCAGCTCATCCAATCCAACCCGCCTCCCTCCACTACAGTCTCCGTCAAAAAACCTCCGGCCAAAGACCGCCACTCCAAAGTCGACGGCCGAGGCCGCCGCATCCGCATGCCGATCATCTGCGCCGCCCGCGTCTTCCAGCTCACCCGCGAGCTCGGTCACAAATCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCATGCCGAACCCTCCATAATCGCCGCCACCGGCACCGGCACCACCCCCGCCTCCTTCTCTTCCTCCACCGGCGCTAGCAACATCAACACTAGCAATATCCATTCTTTATCCCAAAACGCGCCTCCTGTTTTCAGCATCCTCGGTAAACGACTCAGAGAAAACGAAATCGATATGGAGCACAACAATAATAACAGCAATAACGACAACAGCAATAACATCAGTACTGGAAACGGTAACAGTAATAAGATGGTGGTTGGGCCGACGGCGCATGGAGGGTTCTGGGCTATGCCTAGGGCTGATTTCGGACAGATTTGGAGTTTTTCAGGGCAGGATATAGTGATGCCTGGAGAAGCTTCTGCGGCAAGAGTGGGAAACTACTTGCCTATGCCCATGAGTCAAGGGCATTTGAATTTGTTGGCTTCCTTTTCTGCTGGTCCAGCTAGAGGCGGAGGTGGGGGAGCAGATGATGAGAACTGCTGAATTGGGGCTTACTTTTAGGGATTCATTCCAGCCACTTAGGTGTTAGGTTTTGATTTCTTAGGGTTTGTTTAGTAGGTCATGATGGTGATTTCGTGCTTGCTGTAGTTGGTTATTGAAGGTTGCTCAGTCGAATTGAATGACGACGATGGATTATGAAGAGGCAGCAGATTAAACTTTTCTGTAAGCTACTTCTATCGGTGAGTTCCTATTTTGCTTTAATTTGTAATTTATCATGGCTTTTTTGGTTTTCTTATGCTCATGCTTGTGTGTGAAATGTATCTATGTATTTATGAATTGTTCAATTGTTTGGAATGTGTGATGGACTATGCAAATAAATAATGTGAAGATTGTTCCTTGC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020682551.1	7.4e-49	transcription factor TCP7
Swissprot	Q9FMX2.1	5.0e-42	Transcription factor TCP7
trEMBL	A0A0E0CTF8	1.4e-49	TCP domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G23280.1	56.25	7e-56	213		TCP family transcription factor

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G03791	AT5G23280.1	240	48	12	22	230	25	238	56.25	7e-56	213
AfisC7G03791	AT5G08330.1	240	65	10	34	243	25	237	49.17	2e-43	172
AfisC7G03791	AT3G47620.1	95	25	2	17	106	90	183	67.37	2e-32	135

Ortholog group

Species	Genes
Allium cepa	g79495.t1
Allium fistulosum	AfisC7G03791
Allium sativum	Asa3G02023.1
Arabidopsis thaliana	AT5G08330.1; AT5G23280.1
Oryza sativa	LOC_Os02g42380.1; LOC_Os04g44440.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03634.10	TCP	Family	40	158	116.6	1.3e-33

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000987	F	core promoter proximal region sequence-specific DNA binding
GO:0001047	F	core promoter binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009653	P	anatomical structure morphogenesis
GO:0007623	P	circadian rhythm
GO:0008283	P	cell proliferation
GO:0008361	P	regulation of cell size
GO:0009735	P	response to cytokinin
GO:0009737	P	response to abscisic acid
GO:0009739	P	response to gibberellin
GO:0010029	P	regulation of seed germination
GO:0010229	P	inflorescence development
GO:0010252	P	auxin homeostasis
GO:0031347	P	regulation of defense response
GO:0031540	P	regulation of anthocyanin biosynthetic process
GO:0042023	P	DNA endoreduplication
GO:0048364	P	root development
GO:0048467	P	gynoecium development
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:1900056	P	negative regulation of leaf senescence

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K16221	TCP21, CHE; transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)	EC:-	Circadian rhythm - plant	ko04712

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network