Detail information of AfisC7G03952


Location
GeneChrStartEndStrand
AfisC7G03952chr7761082704761091801+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010940651.11.9e-45auxin-responsive protein IAA10
SwissprotA2XB18.25.1e-35Indoleacetic acid-induced protein 10
trEMBLA0A6I9SAW81.4e-45Auxin-responsive protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G33310.147.407e-38 154IAA13auxin-induced protein 13

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag114261.t1
Allium fistulosumAfisC7G03952
Allium sativumAsa3G01959.1
Arabidopsis thalianaAT1G04550.1; AT1G04550.2; AT2G33310.1; AT2G33310.2; AT2G33310.3
Oryza sativaLOC_Os02g57250.1; LOC_Os02g57250.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02309.13AUX_IAAFamily63270181.62e-53

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005634Cnucleus
GO:0009880Pembryonic pattern specification
GO:0009414Presponse to water deprivation
GO:0009506Cplasmodesma
GO:0009611Presponse to wounding
GO:0009630Pgravitropism
GO:0009733Presponse to auxin
GO:0009753Presponse to jasmonic acid
GO:0010051Pxylem and phloem pattern formation
GO:0010200Presponse to chitin
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0048527Plateral root development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14484IAA; auxin-responsive protein IAAEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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